Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0163 ATGTTTCTGAGGCACTCTGCCATGAACAGGAGTTTGAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGGGAAACAGATAATAAGAGGTGGTGAGGAGGACAAAAGAGATCAGAGAGAGAGAGAGAAAAAGATGGGCCCGGTAAAGCCTGCAACAGAAATGAGTGGCACTGCACCAAAGAGTTCTGGGAGAACAAAATATAAGTATTTGGAAATTTCAAGTGAAGTCTCATACAGTAGTGGTTTGGTTCCACTTTGTAGACTAAGGGAAGCTTCTCTAAATGAACATTGCAGTACCAAGAACCTCTTGTTACATTTGCTAGTTGTTATGCCAATGGAGAATGGTATGTACAATATAGCTCTGAACATTTCTGGCCAAGATTCTGCTATTCTAGAAGAAATATCACAACATTCCACCTCAAATCCACTCACTCAGTGCTATTCATTTGTTGACCTTAATAACCAAGCTCATATCATAAATGGAATTTCAATGCTGGCTGGAGAGCAAGGTGAACCACCTATAAGTAATATCCTTTCTGATGTTCACTTCATAAATCCTGCATGTATTGCTGATTCTAGTTCATTAGTCAAATCACAAGGAAAGAATGCTGTGGGAGATTACTCAAATCACATACACAACACTGAATTTCAAGAGCATTTAGCTGCAGGAGTGCCAATCACTCCTGTTTCACTTGCTGCCATTCTTGCTACTAGAATTGGTCTTGAAGAAAATTTAGAGAACTCAACAACTTTTCCACCTTCAATAGGGGCACTGGGCCAATATACCTTCAATAACTGGCAACCTACTTCAAACCCTTTGTCGGCAACTTTCCAGGATTGCGGTTATGAGGAAGTACCGAATCACGGTTACGATGAAGTACATGATGGTAGTAAGTGGAACAATGTCATTGAGTTTCCCAGAGCAAAAGAGATTGATGAAAATGTGTGTCAGCCTTATTCATCCGTAGGAAACATAGATCCAAATGGATGGACATCATCAAGTATTGCTAACTTGACCAATCATGCTTACAATTCCCCAAACTTTAGTAAAGAACTCTCTTTAAGTCTTGCAACATCTCCAACGACGGGACAATGCTCAGAGGTCAGTTTCCCTGATGTGAGCAGCAATAGGGAACTCTCTATGGGTTCTAAGAGATATGTGCAGTTTTCACCATTGGTTTTGGGGTCGAGATATCTCGCAGGAATCCAAGACATCCTTGCTCAAATTGCAAGATATTCATTTGAAAATGTGGAACGGGTAAACGGTTCAGCTGCTGGTAGTAGAACAAGAGGAAATAAATTAAATTCACCTTTCCCAACAATGGGAAGTGTGTTGGTAAATGACAATGAAAATTGTATGTTTGAAGAACCTCATGCAGAATCTCCTTTGCAAAGGCATGCAGCTGAATCAAAGAAATCCCAACTGCTGACACTTCTACAGCTGGTGGACGATCGATATAGCCAGTGTTTGGATGAGATACATACTGTTGTGTCCGCATTCCATGCTGCTACAGAGTTGGACCCTCAAATACATGCACATTTTGCGCTTCAAAGGATCTCTATCTTATACAAGGAGTTGCGAGAGAGGATTAGCAATCATATAATTGGGATGGGATCAGATTTAAACAAGTCTTTTTCAGAAGAGAATAATGAATTTTGCGTTGATACTTTGTTCATTCAAAAGCAATGGGATCTCCAGCAGTTGAAAAGAAAAAATCATCAATTATGGAGACCACAAAGAGGCTTGCCTGAAAGATCTGTCTCAGTTCTAAGGGATTGGATGTTTCAGAACTTCCTCCATCCGTATCCTAAAGATGCAGAAAAGCATTTACTTGCAGTAAAAAGTGGACTGACAAGAAGCCAGGTATCTAACTGGTTTATAAATGCTCGTGTTCGTCTGTGGAAACCTATGATTGATGAAATGTATGCCGAAATGAATAAAAGAAAGGCTTCTCGATACGAACAAGGAATGGAGAGCAGCCATGGGAACAGGAGAAAAGCATGA 2010 0.4015 MFLRHSAMNRSLNRENPDILIMMIAGKQIIRGGEEDKRDQREREKKMGPVKPATEMSGTAPKSSGRTKYKYLEISSEVSYSSGLVPLCRLREASLNEHCSTKNLLLHLLVVMPMENGMYNIALNISGQDSAILEEISQHSTSNPLTQCYSFVDLNNQAHIINGISMLAGEQGEPPISNILSDVHFINPACIADSSSLVKSQGKNAVGDYSNHIHNTEFQEHLAAGVPITPVSLAAILATRIGLEENLENSTTFPPSIGALGQYTFNNWQPTSNPLSATFQDCGYEEVPNHGYDEVHDGSKWNNVIEFPRAKEIDENVCQPYSSVGNIDPNGWTSSSIANLTNHAYNSPNFSKELSLSLATSPTTGQCSEVSFPDVSSNRELSMGSKRYVQFSPLVLGSRYLAGIQDILAQIARYSFENVERVNGSAAGSRTRGNKLNSPFPTMGSVLVNDNENCMFEEPHAESPLQRHAAESKKSQLLTLLQLVDDRYSQCLDEIHTVVSAFHAATELDPQIHAHFALQRISILYKELRERISNHIIGMGSDLNKSFSEENNEFCVDTLFIQKQWDLQQLKRKNHQLWRPQRGLPERSVSVLRDWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIDEMYAEMNKRKASRYEQGMESSHGNRRKA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0163 669 Gene3D - 581 660 - -
Lal4g0163 669 MobiDBLite consensus disorder prediction 32 64 - -
Lal4g0163 669 SMART prehox3 389 534 IPR006563 -
Lal4g0163 669 Pfam Associated with HOX 395 533 IPR006563 -
Lal4g0163 669 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 123 666 - -
Lal4g0163 669 SMART HOX_1 578 642 IPR001356 GO:0003677
Lal4g0163 669 Pfam Homeobox KN domain 595 634 IPR008422 GO:0003677|GO:0006355
Lal4g0163 669 SUPERFAMILY Homeodomain-like 580 647 IPR009057 -
Lal4g0163 669 CDD homeodomain 578 639 IPR001356 GO:0003677
Lal4g0163 669 MobiDBLite consensus disorder prediction 32 50 - -
Lal4g0163 669 ProSiteProfiles 'Homeobox' domain profile. 575 638 IPR001356 GO:0003677
Lal4g0163 669 PANTHER HOMEOBOX PROTEIN ATH1 123 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0163 Lal-Chr4 1021117 1025153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0163 353 651 Homeobox Transcription Factor Family AT4G32980 57.003 1.99e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal4g0163 POX 1.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0163 - - lang:109343832 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0163 4 1021117 1025153 Lal4g0163 4 1021117 1025153 ECH
Lal21g0263 21 1750274 1752402 Lal4g0163 4 1021117 1025153 LSH