Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0132 ATGATGGCTACTCATGATTTGTATTGCTTTGAGGAAAACATGGGATTAGATGAGTTATTAGAATATAATGTGTGCGTCAGTGATTCCACTACTAGCACGTTAATAAACTCAAACTCAAACTCAAACTCAAACTCAAACCCAAACTACCCTTGTATGCTGTTAGAACAGGACATGTTTTGGGACGATGAAGAGTTAACATCACTGTTGGCCAAAGAACAACACAACCCGCTTCGCACGTGTGTCCAAATTGGTACGGTGTTGGAGGGAGCGCGTAGTGAAGCTGTATTGTGGATACTGAAAGTGAATGCCCACTACTCATTTTCTGCTCTCACAGCTGTTCTTGCGGTTAACTACCTTGACAGGTTCCTTTTCAGCTTCAGATTTGAGAATGGGAAACCATGGATGACTCAACTTGCTGCTGTCGCGTGTCTTTCACTCGCTGCCAAGGTTGAAGAGACCCAAGTTCCCCTTTTACTAGACCTTCAGGTGGAGGATTGTAAATACTTGTTTGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTGCTTTCCACTCTTGAATGGAAAATGAATCCACCAACCCCTTTATCTTTTCTTGATTATATCATAAGAAGACTTGGATTGAAAAATGATTATCTTCTATGTTTGGAGTTCTTCAAGAGATGCGAGGCCGTTCTAATCTCTCTCATTCCAGATACCAGGTTTATGAGTTATCTCCCTTCTGAGTTGGCAACTGCCACGATGATGCATGTTATCAATAGCGTGGAGCCTTGTCTAGGAATTAAATACAAAACTCAGCTTCTTGGTATTCTTGAAATCAACAAGGAGAAGATGGATGAGTGTTGCAAGCTCATGGTGTGTTGTGGATATGAAAGGGATAAGCAATGCAAGAAGCGTAGGTTTGGGTCCATTCCAGGTAGTCCAAATGGTGTAATGGACGTGTCTTTTAGCTCTCATAGTTCCAATGACTCGTGGCCAATTTCTACTTCTGTTTCATTCTCACAAGAGCCTTTTTCAAAGAAGACTAGGACTCAAGAAGAGCTTCTACTAAACAATCCCACCTCAGATTTTTTCACCATTCCTCGCTAG 1089 0.416 MMATHDLYCFEENMGLDELLEYNVCVSDSTTSTLINSNSNSNSNSNPNYPCMLLEQDMFWDDEELTSLLAKEQHNPLRTCVQIGTVLEGARSEAVLWILKVNAHYSFSALTAVLAVNYLDRFLFSFRFENGKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEDCKYLFEAKTIKRMEILVLSTLEWKMNPPTPLSFLDYIIRRLGLKNDYLLCLEFFKRCEAVLISLIPDTRFMSYLPSELATATMMHVINSVEPCLGIKYKTQLLGILEINKEKMDECCKLMVCCGYERDKQCKKRRFGSIPGSPNGVMDVSFSSHSSNDSWPISTSVSFSQEPFSKKTRTQEELLLNNPTSDFFTIPR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0132 362 Pfam Cyclin, C-terminal domain 193 318 IPR004367 -
Lal4g0132 362 Pfam Cyclin, N-terminal domain 87 191 IPR006671 -
Lal4g0132 362 SMART Cyclin_C_2 193 322 IPR004367 -
Lal4g0132 362 ProSitePatterns Cyclins signature. 91 122 IPR006671 -
Lal4g0132 362 SUPERFAMILY Cyclin-like 59 191 IPR036915 -
Lal4g0132 362 CDD CYCLIN 91 183 IPR013763 -
Lal4g0132 362 Gene3D - 79 191 - -
Lal4g0132 362 Gene3D - 192 283 - -
Lal4g0132 362 PANTHER CYCLINS 34 343 IPR039361 -
Lal4g0132 362 SUPERFAMILY Cyclin-like 176 297 IPR036915 -
Lal4g0132 362 SMART cyclin_7 96 184 IPR013763 -
Lal4g0132 362 PANTHER CYCLIN D3.1 PROTEIN 34 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0132 Lal-Chr4 824655 826647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0132 50 292 Core Cell Cycle Gene Families AT4G34160 55.144 6.49e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0132 K14505 - aprc:113874132 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0132 4 824655 826647 Lal15g0180 15 1255978 1258523 ECH
Lal4g0132 4 824655 826647 Lal15g1257 15 14175067 14177312 ECH
Lal4g0132 4 824655 826647 Lal23g0189 23 1672243 1674788 ECH
Lal4g0132 4 824655 826647 Lal13g0405 13 2535872 2538092 ECH
Lal4g0132 4 824655 826647 Lal12g0409 12 2906137 2908184 ECH
Lal4g0132 4 824655 826647 Lal24g0325 24 2308314 2310804 ECH
Lal4g0132 4 824655 826647 Lal4g0132 4 824655 826647 ECH
Lal21g0217 21 1428124 1430020 Lal4g0132 4 824655 826647 LSH