Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0131 ATGGGTACTCACACCGTGTTCTTATTGTTCCTCCTCTCAAATTCATATCTCTCATTTTCCCTACCACTATCACAACCTGATGGTCGTGCCTTACTTGCATTCAAATCAAAAGCTGATCTCAACAACATCCTTCAATACCATTCCTCTTCAAACTTCTCCACTCTTAGTTTCTGCCACTGGCAAGGTGTACAATGCAACCACCACAAAGTAACACGCTTCATTCTTCAACACTTAGATCTTTCTGGCTTCTTTGCTCCAAACACTTTGTCCCGTCTTGATCAGCTTCGAGTCCTTAGTTTACAAAACAACTCTCTCACTGGACCCATACCTGATCTCACTGCTCTCTATAATCTCAAATCCCTCTTCCTTAATAATAACCGTTTCATTGGTTTACTTCCTCCTTCACTTTTTTCACTTCACCGCCTCCGAACCCTGGATTTCTCTCATAACAATTTCTCTGGACCGATCTCGACCGGGTTTATTAACTTAGACCGGCTCATCTACCTCCGGCTTAGTTATAACCGTTTCAACGGAAGCGTTCCACCGCTAAACCAGTCTTCTCTTAAAACCTTCGACGTCTCCGGTAACAATCTCACCGGCGCTATTCCGGTAACACCGACATTGTTCCAATTTGAACCTTCCTCCTTCTCCTTCAACCCAGGCCTCTGCGGCGAGATCGTCCACAAAGAATGTCACCCTACCGCACCTTTCTTCAGCAACACAACATCATCGTCGCCGGCGGCGGCGGAAACGCTGAGCCAGAGCGCGCAAATACACGGTGGTGTCAATGGCTTAATCCGGCAACCATACCCCAAAAAGCATACCAGGAAAGCAGTAATTATCGGATTCTCAACCGGAATATTGTTTCTGATGATTTCACTAGTTTTCTTCGTGATAACGGTTAAGAAAAATAGAAAGAAGAAGCGAGGTTCGGGTTTGAATGATTTGAATTCCGATGCAATGGCGACAGAGGAAGTAGCAAAGGTGATGCAAATGGAGCAGGAGAGGGAGTTAGAGGAGAAAGTGAAAAGAGTAGAGGTAGCTAAGAGCGGGAACTTAGTATTCTGTGCTGGTGAGGTGCATGTTTATACGGTGGAACAGTTGATGAAGGGTTCAGCGGAATTGTTAGGGAGGGGCAATTTGGGAACAACGTATAAAGCGGTATTGGATAATCGTCTGATCGTGACGGTGAAGAGGCTCGATGCGTTGAAAATGGCTGGGAATACAAATAAGGAAGTGTTCCAGCGACACATGGAATCAGTGGGAGGGCTTAGGCACCCTAATTTGGTTCCTCTTAGGGCTTATTTTCAAGCCAAAGAAGAAAGACTCATTATCTATGATTACCAACCTAATGGGAGTCTCTTTTCCCTTATTCATGGTTCCAAATCAAGCAGGACAAGGCCATTGCACTGGACATCATGTTTAAAAATAGCAGAGGACGTAGCACAAGGGCTGTCCTACATCCATCAGGCATGGAGACTGGTCCATGGCAATCTCAAGTCCTCCAATGTTCTTCTTGGAGCTGATTTTGAGGCATGCATCACAGACTACTGCCTCACAGTGTTGGCCAACCCATCCAGCTTTGATGAAGATGTTGATTCTGCAACCTACAGAGCTCCAGAAACTCGAAACCCAAATAACCAGCCTACTCCCAAATCCGACGTTTATGCCTATGGCATTTTGTTGCTAGAGCTTCTCACTGGGAAACCTCCTTCTGAGCTACCATTCTTGGCTCCTGGTGATATGTTAAGTTGGGTTAGATCCATTAGGGATGATAACGGAGGTGAAGACAACAGAATGGACATGCTTCTTCAGGTTGCTACAACTTGTAGCTTGGCCTTGCCTGAGCAGAGACCCACTATGTGGCAGGTCTTAAAGATGTTGCAGGAAATCAAACAGATTGTATTATTGGAAGATAGTGACTTGGAACTACGCACTAATGTCATGCCTTAA 1953 0.4531 MGTHTVFLLFLLSNSYLSFSLPLSQPDGRALLAFKSKADLNNILQYHSSSNFSTLSFCHWQGVQCNHHKVTRFILQHLDLSGFFAPNTLSRLDQLRVLSLQNNSLTGPIPDLTALYNLKSLFLNNNRFIGLLPPSLFSLHRLRTLDFSHNNFSGPISTGFINLDRLIYLRLSYNRFNGSVPPLNQSSLKTFDVSGNNLTGAIPVTPTLFQFEPSSFSFNPGLCGEIVHKECHPTAPFFSNTTSSSPAAAETLSQSAQIHGGVNGLIRQPYPKKHTRKAVIIGFSTGILFLMISLVFFVITVKKNRKKKRGSGLNDLNSDAMATEEVAKVMQMEQERELEEKVKRVEVAKSGNLVFCAGEVHVYTVEQLMKGSAELLGRGNLGTTYKAVLDNRLIVTVKRLDALKMAGNTNKEVFQRHMESVGGLRHPNLVPLRAYFQAKEERLIIYDYQPNGSLFSLIHGSKSSRTRPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGADFEACITDYCLTVLANPSSFDEDVDSATYRAPETRNPNNQPTPKSDVYAYGILLLELLTGKPPSELPFLAPGDMLSWVRSIRDDNGGEDNRMDMLLQVATTCSLALPEQRPTMWQVLKMLQEIKQIVLLEDSDLELRTNVMP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0131 650 SUPERFAMILY Protein kinase-like (PK-like) 374 634 IPR011009 -
Lal4g0131 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 640 - -
Lal4g0131 650 SUPERFAMILY L domain-like 30 223 - -
Lal4g0131 650 Gene3D Ribonuclease Inhibitor 185 235 IPR032675 -
Lal4g0131 650 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Lal4g0131 650 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Lal4g0131 650 ProSiteProfiles Protein kinase domain profile. 370 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0131 650 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Lal4g0131 650 Gene3D Phosphorylase Kinase; domain 1 326 448 - -
Lal4g0131 650 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 5 640 - -
Lal4g0131 650 Pfam Protein kinase domain 374 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0131 650 Gene3D Transferase(Phosphotransferase) domain 1 450 642 - -
Lal4g0131 650 ProSiteProfiles Leucine-rich repeat profile. 94 116 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0131 Lal-Chr4 808327 815908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0131 24 642 Receptor kinase-like Gene Family AT5G43020 58.333 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal4g0131 Pkinase 4.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0131 - - gmx:100817172 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0214 21 1405122 1409622 Lal4g0131 4 808327 815908 LSH