Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0125 ATGAACTTCAAGGGCTTCGGAAACGACCCGGGTGGCTCCGACAACGGTGGCGGATGGAGAACTCCGGCGCCGGTGAATAATCTGACACGGCAATCCTCCGTATACTCGCTGACATTCGACGAGTTCATGACCACTATGGGTGGTTCAGGTAAGGATTTTGGATCAATGAACATGGATGAGTTGCTAAAAAATATTTGGACAGCTGAAGAAATTCAAACGACGGGATCCGCCACCGCGGTTCAACCGGGTACCGGAACTCTCGGTGGCGGTGGTGGTGTTAGTCATTTGCAGAAGCAAGGGTCTTTGACTCTGCCAAGGACCCTTAGTCAGAAGACAGTGGATGAAGTTTGGAAAGATATTTCAAAGGATTATGGTGGCAGTAGTGGAAGTAGAGTTCCTAATTTGGCTCAGGCTGAGAGACAACCTACTTTGGGGGAAATGACTTTGGAGGAGTTTTTGGTGAGAGCTGGTGTTGTCAGAGAAGATGCTCAACAATTGAGTGCAAATCAAAATGATGCTGTTTTTGGTGGTTTAGGAATGGGGATGGGGTATCATCAGCAATTGAATAATGTTAATGGATTGCTGGGTAATAATACTAATAGAATTGGTGGTGTTGGTGTGAATAATAGTGATCCAAATTCAATGGTGGTGAGTCTTCAGTCTCCTAGTACTAATTTGCCCTTGAATGTTAATGGTGTTAGATCATCAAATCAACAACAGCAACAGATGCAGCAGAACTCACACTCTCAGCAGCAACAGCATCAGCAGATATTTCCTAAGAGTTATGCTACTCAGATGCCATTGGCTAATAATCAAGGAATGAGAGGTGGAATTGTGGGACTCGCTGTTGATCAAGGCATGAATGGTGGTGGAAATCTTGTGCAAGGTATGGTTGGTGTGCAACCTGGGTCAGTTCATGTGCCTAATGGATCTCCAGCTAACAGTGATAAAATTGGAAAGAGCAATGGCGATACTTCTTCTGTGTCACCGGTTCCTTATGTCTTTAACAGTGGTCTGCGCGGTAGGAAGAATGGTGGAGCTGTGGAGAAGGTGATTGAGAGGAGGCAGAGGAGGATGATAAAGAATAGAGAGTCAGCTGCAAGGTCAAGGGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAGGACAACGAAGCACTTCAGAAAAAACAGGCGGAAATCATGGAAATTCAGAAAAATCAAGTTATGGAAATGATGAATTTGCAACGAGAAGTCAAGAGGAGATGCTTAAGGAGAACACTAACTGGTCCATGGTAG 1299 0.4496 MNFKGFGNDPGGSDNGGGWRTPAPVNNLTRQSSVYSLTFDEFMTTMGGSGKDFGSMNMDELLKNIWTAEEIQTTGSATAVQPGTGTLGGGGGVSHLQKQGSLTLPRTLSQKTVDEVWKDISKDYGGSSGSRVPNLAQAERQPTLGEMTLEEFLVRAGVVREDAQQLSANQNDAVFGGLGMGMGYHQQLNNVNGLLGNNTNRIGGVGVNNSDPNSMVVSLQSPSTNLPLNVNGVRSSNQQQQQMQQNSHSQQQQHQQIFPKSYATQMPLANNQGMRGGIVGLAVDQGMNGGGNLVQGMVGVQPGSVHVPNGSPANSDKIGKSNGDTSSVSPVPYVFNSGLRGRKNGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEDNEALQKKQAEIMEIQKNQVMEMMNLQREVKRRCLRRTLTGPW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0125 432 Coils Coil 377 407 - -
Lal4g0125 432 MobiDBLite consensus disorder prediction 232 256 - -
Lal4g0125 432 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 432 - -
Lal4g0125 432 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 352 403 IPR004827 GO:0003700|GO:0006355
Lal4g0125 432 MobiDBLite consensus disorder prediction 1 26 - -
Lal4g0125 432 Gene3D - 352 408 - -
Lal4g0125 432 SMART brlzneu 350 415 IPR004827 GO:0003700|GO:0006355
Lal4g0125 432 Pfam bZIP transcription factor 354 404 IPR004827 GO:0003700|GO:0006355
Lal4g0125 432 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 432 IPR043452 GO:0003700|GO:0045893
Lal4g0125 432 CDD bZIP_plant_BZIP46 354 408 - -
Lal4g0125 432 SUPERFAMILY Leucine zipper domain 354 403 IPR046347 GO:0003700|GO:0006355
Lal4g0125 432 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 357 372 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0125 Lal-Chr4 768298 772094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0125 28 432 bZIP Transcription Factor Family AT1G49720 46.154 2.23e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal4g0125 bZIP_1 1e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0125 4 768298 772094 Lal4g0125 4 768298 772094 ECH