Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0123 ATGGACCAGTTAAACTCGTCCCTTTCGGAGGATGAATATCAGATGGAAATGATGATGATGCACTTCCCTGAATTCTCTGCAGCTTATGGCCAAAACGACACCGTTGAGAAATTTCCACAACCAGAGTTCAGCGGCGGCGCCGTTAACACTAACACTATGCCACTGGCTGATTTAATTAATAACCCTCCTATGCCTTGGTCTTCATTCACAAACTCACCCTCCTCTTCAATCTCTTTCACCAATAACCCTACTCAAGTACTTCACCAACAAGAACAAAACCGACCAGCTATGTTGTCGAATTCAGTCAAGGAAAGTTGGGAACCCAGCAACACGATTGAGGCTGCAAACCATTATGAGAAGAGGAACTCGATGGCAGCGATGAGGGAAATGATATTCAGGATAGCATCCATGCAACCAATATACATAGACCCAGAATCATTGAAACCACCAAAGAGGAGGAACGTGAAAATTTCAAAGGATCCTCAGAGTGTTGCAGCACGTCACCGTAGAGAAAGGATAAGCGAGAAGATAAGGATACTACAAAGACTAGTACCTGGAGGGACTAAGATGGACACTGCTTCAATGTTGGATGAAGCTATTCACTACGTCAAGTTTCTCAAGTCTCAGGTTCAGTCACTTGAACGAGTTGCTACCAATACAAGGCCAGTTCATGCTACAGGAATAGGCTTCCCTGTCGCAATGAATCCTCTACCTAAACCTTATCAAGATTGA 732 0.4413 MDQLNSSLSEDEYQMEMMMMHFPEFSAAYGQNDTVEKFPQPEFSGGAVNTNTMPLADLINNPPMPWSSFTNSPSSSISFTNNPTQVLHQQEQNRPAMLSNSVKESWEPSNTIEAANHYEKRNSMAAMREMIFRIASMQPIYIDPESLKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERVATNTRPVHATGIGFPVAMNPLPKPYQD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0123 243 Gene3D - 156 224 IPR036638 GO:0046983
Lal4g0123 243 CDD bHLH_AtIND_like 158 214 - -
Lal4g0123 243 SMART finulus 163 212 IPR011598 GO:0046983
Lal4g0123 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 220 IPR036638 GO:0046983
Lal4g0123 243 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 2 235 - -
Lal4g0123 243 Pfam Helix-loop-helix DNA-binding domain 167 206 IPR011598 GO:0046983
Lal4g0123 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 2 235 IPR045843 GO:0003700|GO:0006355
Lal4g0123 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0123 Lal-Chr4 752648 754074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0123 124 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 88.660 5.77e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal4g0123 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0123 - - gmx:100815041 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0123 4 752648 754074 Lal4g0123 4 752648 754074 ECH