Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0112 ATGTTTTGTATTTCTCTTCCACTCCAAAATCACACTCTACTTTCCCCTCACCCTACTCAGCTTCCTAATCATGGCTTGAAAACAGAACCAATCTGGGAGGTGGATAAAGGTGGAACGCAGTCGTTTCTTGAAACTGATGCTGACGTGGATTCCAAAGATTTTAAAACAAGTTGTTGCTGGTTTTCGCGGTTTTTGAACGTTTGTTCTAAGGAAGGGGACTTTGTTGAAGTTTGTGATGGAAAACTATTGGTGAATGGTGTTGCTGAAGAAGAGGAATTCATTTTAGAACCTCTTGAGTATGAGATGGATCCAGTGGTTGTGCCGGAAGGATGTGTTTTTGTGATGGGAGACAATCTCTCTCTACCACTGGCTTCCTCTGTTGTTTCTGCTGGAGAAAGTGTTGCTTTAGGTGGACCATACATTTTGGTCTATGTGTTCATGCTGGGTCCACTCCCTATTAAGAACATTGTTGGTAGATCCATGTTTCGTTACTGGCCTCCATCCAAAGTATCTGACACTGACACCCTTCTTCATAAACCTGCACCTGGAAACATTTACGTGGCAATGGATTGCTGCTCGCACTTGCCTCAGAGTGAGCTCGTATCTGTAATCTATTTGACGATTTTGATAGCTTCAACAAAATACAGTGATGCTGGAACAGCAACATAA 669 0.426 MFCISLPLQNHTLLSPHPTQLPNHGLKTEPIWEVDKGGTQSFLETDADVDSKDFKTSCCWFSRFLNVCSKEGDFVEVCDGKLLVNGVAEEEEFILEPLEYEMDPVVVPEGCVFVMGDNLSLPLASSVVSAGESVALGGPYILVYVFMLGPLPIKNIVGRSMFRYWPPSKVSDTDTLLHKPAPGNIYVAMDCCSHLPQSELVSVIYLTILIASTKYSDAGTAT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0112 222 SUPERFAMILY LexA/Signal peptidase 70 170 IPR036286 -
Lal4g0112 222 Gene3D Umud Fragment, subunit A 65 175 - -
Lal4g0112 222 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 67 174 - -
Lal4g0112 222 Pfam Signal peptidase, peptidase S26 70 165 IPR019533 GO:0004252|GO:0006465
Lal4g0112 222 PANTHER SIGNAL PEPTIDASE I 67 174 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0112 Lal-Chr4 690686 694046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0112 K03100 - gmx:100817525 119.012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0112 4 690686 694046 Lal4g0112 4 690686 694046 ECH
Lal21g0172 21 1136348 1138848 Lal4g0112 4 690686 694046 LSH