Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0111 ATGCAGGCCTCAGGCTGCTCTGTGGTTCTTTCCTTGTTACTAATCTCATCATTCTCATCCTTCTCCTTTGCGCTTTCCAATGTTGAAGCCTCTTTCATTGCTCGTCGCCAATTGTTACACCTTCATGAGCATGAGGAATTAACAGAGTCCTATGTAGAAAGCTACAAAACAGATCTAAAATTTGATAACCCAAGGCTCAAACGTGCATACATTGCATTTGAGGCATGGAAAAAAGCAATATATTCTGACCCATCAAACATCACATCTGATTGGGTGGGACCGGATGTTTGCTCCTACAAAGGAGTTTTCTGTGCACCTGCCCTTGATGATCCTAAGATCGAAGTTGTGGCCGGGATTGATCTTAACCATGCAGACATTGCTGGTTACATTCCTCCTGAGTTTGGTTTGTTAACTGATCTTGCTCTTTTCCATATTAACTCAAACAGGTTCTGTGGTGTTCTCCCAAAGAGCTTTTGCAATCTAAAACTTATGCATGAGCTTGATATCAGTAACAACCGCTTCGTTGGTCCATTCCCTCAATCTGTTCTTTGCCTTCAAGATATCAAATATCTTGACCTGAGGTTCAATGACTTCGAAGGGGAGCTACCTTCTGAGCTATTCAACAAGACACTTGATGCTATCTTTTTGAATAGCAACAGATTTGTGTCCGTGATTCCAGAGAACCTAGGGAACTCACCAGCTTCAGTTATTGTTTTGGCCAATAACCATTTCAATGGTTGTCTTCCTGGAAGCATTGGTCAAATGGACAAGACCTTGAATGAGTTTGTGTTGGTTAACAACAACGTCTCAGGGTGCTTACCCTCTGAAATTGGAAAACTTTCCAGCATTGAGGTGTTTGATGTGAGCCATAATATGTTTGTCGGTGTGTTGCCAAAGACATTAAATGGACTTGGAAAGGTGGAAGAGTTATCCATTGCAAATAACAAACTCACAGGTTCTGTCCTACATAGCATTTGTAGCTTGCCTAACTTGGTGAACTTCACATTCTCTTATAACTATTTCAATGGAGAGGAAGAAGGTTGTGTGCCTCGATCTAGAAAGGAGATTGAGTTGAATGATGAGAGGAATTGCATTTCTAATAGGCCAAAACAGAGGGATGCAAGTGAATGCAATGCAGTCATAAGCAAACCTATTGATTGCAACAAAGCTCAGTGTAGCCACCCTTCAACCCCATCTCACTCTAATAATCCCCCAAGTCAAACTCCATCAGAACCAAAACCCACCCCTTCAACTTCCAATCCACCAACTGAGACTCCATCGGAACCAGAATCATCACCACAGACACCCGAAACCCCCAAAACACAAGCACCACCAACACCAGAAACGGCCAAGGCACAATCTCCACCCACACTAGAAACGGCCAAGGCACAATCTCCACCCACACCACAAACACCCAAACCGGAGCCACCACCAACTCCTAAAGCCGAGCCACCACCCAAACCACAAACACCCAAGCCAGAACCACCACCAACCCCCAAATCAGAACCACCACCCACACCAGAAACACCCAACCTAGAACCACCACCAACACCCAAGCCAGAACAACCATCAACCCCCAAAGTAGAGCCACCACAAGCACCTAAACTACAACCACCGCCTACACCAGAAACACCTAAATTGTCACCACCTGAGGAGGATCCTCACCGCGAAGCACCCCGAGGACGACTAAGGACTCCACCAACGCCAGTCCAGTCTCCTCCTCCACCAACTAACTCCCCACCCCCACCAGTTCACTCTTCACCACCCCCTGTCCACTCACCACCACCGCCGGTTCATTCTCCACCCCCACCAATCCATTCTCCACCTCCACCAGTCCATTCTCCACCACCACCAGTCCATTCTCCGCCTCCACCGGTCCATTCTCCACCTCCACCGGTCCATTCTCCACCTCCACCGGTCCATTCTCCACCTCCACCGGTCCATTCTCCACCTCCACCGGTCCATTCTCCACCACCACCAGTCCATTCTCCACCACCACCGGTCCATTCTCCACCACCACCAGTCCATTCTCCGCCTCCACCGGTCCATTCTCCACCTCCACCGGTCCATTCTCCACCACCACCAGTCCATTCTCCACCACCACCGGTCCATTCTCCACCACCACCAGTCCATTCTCCACCACCACCGGTCCATTCTCCACCACCACCAGTCCATTCTCCACCACCACCGGTCCATTCTCCACCACCACCACCGGTCCATTCTCCACCACCACCTGTCTATTCTCCTCCACCACCAGTTCATTCACCGCCACCACCACCCGTCAACTCACCTCCACCACCGGTTCACTCACCACCACCACCAGTTCACTCACCACCACCACCAGTTCACTCACCACCACCACCCGTCTACTCCCCACCACCACCAGTACAGTCTCCTCCTCCACCTGTCCAATCCCCACCACCACCTACACCAACTGTTTCACCTCCTCCTCCAGAAGAAGAAGACATCATTCTTCCACCTCACTTTGGCTCTTCATATGCTTCACCCCCTCCGCCAATCATCGCTGGCTACTAA 2535 0.4966 MQASGCSVVLSLLLISSFSSFSFALSNVEASFIARRQLLHLHEHEELTESYVESYKTDLKFDNPRLKRAYIAFEAWKKAIYSDPSNITSDWVGPDVCSYKGVFCAPALDDPKIEVVAGIDLNHADIAGYIPPEFGLLTDLALFHINSNRFCGVLPKSFCNLKLMHELDISNNRFVGPFPQSVLCLQDIKYLDLRFNDFEGELPSELFNKTLDAIFLNSNRFVSVIPENLGNSPASVIVLANNHFNGCLPGSIGQMDKTLNEFVLVNNNVSGCLPSEIGKLSSIEVFDVSHNMFVGVLPKTLNGLGKVEELSIANNKLTGSVLHSICSLPNLVNFTFSYNYFNGEEEGCVPRSRKEIELNDERNCISNRPKQRDASECNAVISKPIDCNKAQCSHPSTPSHSNNPPSQTPSEPKPTPSTSNPPTETPSEPESSPQTPETPKTQAPPTPETAKAQSPPTLETAKAQSPPTPQTPKPEPPPTPKAEPPPKPQTPKPEPPPTPKSEPPPTPETPNLEPPPTPKPEQPSTPKVEPPQAPKLQPPPTPETPKLSPPEEDPHREAPRGRLRTPPTPVQSPPPPTNSPPPPVHSSPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVYSPPPPVHSPPPPPVNSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVQSPPPPVQSPPPPTPTVSPPPPEEEDIILPPHFGSSYASPPPPIIAGY 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0111 844 Gene3D Ribonuclease Inhibitor 71 235 IPR032675 -
Lal4g0111 844 Gene3D Ribonuclease Inhibitor 236 403 IPR032675 -
Lal4g0111 844 MobiDBLite consensus disorder prediction 390 844 - -
Lal4g0111 844 MobiDBLite consensus disorder prediction 548 562 - -
Lal4g0111 844 MobiDBLite consensus disorder prediction 444 466 - -
Lal4g0111 844 MobiDBLite consensus disorder prediction 405 443 - -
Lal4g0111 844 MobiDBLite consensus disorder prediction 390 404 - -
Lal4g0111 844 SUPERFAMILY L domain-like 77 347 - -
Lal4g0111 844 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 492 647 - -
Lal4g0111 844 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 609 709 - -
Lal4g0111 844 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 703 841 - -
Lal4g0111 844 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 2 393 - -
Lal4g0111 844 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 636 737 - -
Lal4g0111 844 PRINTS Proline rich extensin signature 393 405 - -
Lal4g0111 844 PRINTS Proline rich extensin signature 405 426 - -
Lal4g0111 844 PRINTS Proline rich extensin signature 429 445 - -
Lal4g0111 844 PRINTS Proline rich extensin signature 465 490 - -
Lal4g0111 844 MobiDBLite consensus disorder prediction 566 823 - -
Lal4g0111 844 MobiDBLite consensus disorder prediction 467 547 - -
Lal4g0111 844 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 703 841 - -
Lal4g0111 844 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 609 709 - -
Lal4g0111 844 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 492 647 - -
Lal4g0111 844 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 636 737 - -
Lal4g0111 844 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0111 Lal-Chr4 686385 688919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0111 5 564 Trihelix Transcription Factor Family AT3G19020 50.579 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0111 - - gmx:100780677 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0111 4 686385 688919 Lal4g0111 4 686385 688919 ECH
Lal17g0093 17 581872 583722 Lal4g0111 4 686385 688919 LSH
Lal21g0170 21 1130486 1132927 Lal4g0111 4 686385 688919 LSH