Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0097 ATGGGTTGGACAAGAGAAGAGAATAGAAGATTTGAGGATGCTCTTGCAGTGCATGGTCCTAACGACCCAAACAGGTGGCAAAATGTAGCCAATGCTGTAGGTGGAAAATCTGTAGAAGAAGTGAAAAGGCACTATGAGATTCTTAAGGAAGATGTGATTCGAATAGAGTGTGATCAAATTCTACCACCCAAGTACAGAGGAGCTGGCATAAACGTGAGGAAGATAGTCAATGACCAAAGGTAA 243 0.4239 MGWTREENRRFEDALAVHGPNDPNRWQNVANAVGGKSVEEVKRHYEILKEDVIRIECDQILPPKYRGAGINVRKIVNDQR 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0097 80 CDD SANT 3 49 IPR001005 -
Lal4g0097 80 SMART sant 3 51 IPR001005 -
Lal4g0097 80 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Lal4g0097 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Lal4g0097 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Lal4g0097 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Lal4g0097 80 SUPERFAMILY Homeodomain-like 3 55 IPR009057 -
Lal4g0097 80 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Lal4g0097 80 Gene3D - 2 51 - -
Lal4g0097 80 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0097 Lal-Chr4 604358 604600 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal4g0097 Myb_DNA-binding 9.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0097 - - gmx:100789698 134.42