Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0091 ATGTCTCACGTTCTCAGTGAAATCCTTTGTTCTGGATTTATTATAGACTCTTCTCTCAGACGCAGGACCCACTTAGTTCAATCTCTTTCTGTTACCTTCCTCTACTGGTTCTATGTTTTTTCATTTTTTTCTGAAACCATCATTACTGTAATTGTAATTGTAACTGTAACTGGTCGGAACCATAATTTATGTACAAATTTGATGGCACCATCCACTACTGGAAATTCTTCTACATGCACAAAATTTCAGAGCTCTGGTTCTGAAGAGGATTTGAAGGTTCTTATGGATCAAAGAAAAAACAAGAGAAAAGTGTCGAATAGAGAATCAGCAAGAAGGTGTAGGATGAGAAAGCAGAATCACATAGATGATATGATGAATCAGGTGTCTCAACTAACAAAAGACAAGAGTGAAATCCTCACAAGTGTTAACATCACCACACAGCACTATCTGAATGTTGAAGCTGAGAATTCCATTTTAAGAGCCCAGATTATTGAACTTAACCAAAGATTTGAATCACTAAATGGTATTATCAATCTCATCAACACAAGTACTACAAATGGAAATGGGGCATATGAAAGAGATTGTTATCTAACTAGTGATGAGAATTTCATGAATCCCATTAACATGCTCTATCTTAATGAACCAACCCATTATGGCTTCTAA 663 0.356 MSHVLSEILCSGFIIDSSLRRRTHLVQSLSVTFLYWFYVFSFFSETIITVIVIVTVTGRNHNLCTNLMAPSTTGNSSTCTKFQSSGSEEDLKVLMDQRKNKRKVSNRESARRCRMRKQNHIDDMMNQVSQLTKDKSEILTSVNITTQHYLNVEAENSILRAQIIELNQRFESLNGIINLINTSTTNGNGAYERDCYLTSDENFMNPINMLYLNEPTHYGF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0091 220 PANTHER BZIP TRANSCRIPTION FACTOR 44 71 215 - -
Lal4g0091 220 Pfam bZIP transcription factor 98 138 IPR004827 GO:0003700|GO:0006355
Lal4g0091 220 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 101 116 IPR004827 GO:0003700|GO:0006355
Lal4g0091 220 SMART brlzneu 94 158 IPR004827 GO:0003700|GO:0006355
Lal4g0091 220 Gene3D - 92 174 - -
Lal4g0091 220 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 159 IPR004827 GO:0003700|GO:0006355
Lal4g0091 220 SUPERFAMILY Leucine zipper domain 98 151 IPR046347 GO:0003700|GO:0006355
Lal4g0091 220 CDD bZIP_plant_GBF1 99 149 IPR045314 GO:0003700|GO:0006355
Lal4g0091 220 Coils Coil 149 169 - -
Lal4g0091 220 PANTHER BZIP TRANSCRIPTION FACTOR 71 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0091 Lal-Chr4 553426 554177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0091 94 215 bZIP Transcription Factor Family AT4G34590 51.908 4.04e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal4g0091 bZIP_1 4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0091 K25786 - rcu:8275772 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0091 4 553426 554177 Lal4g0091 4 553426 554177 ECH
Lal21g0142 21 980785 981243 Lal4g0091 4 553426 554177 LSH