Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0085 ATGAGGAACGAAGGTTGTTTTCCAACGATGGATCTTCTCAGATCTGAGCCAATGCAACTTGCTCAATTGATTATTCCAATTGAATCAGCTCATCGATCCATCTCTTACCTCGGAGATCTAGGCCTTTTCCAATTCAAAGATCTTAATGCAGATAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCACGCACACTACGTTTATTTAAAGAACAAATGGTAAAGGCTGGTGTATCACCCTCGACGCTCTCAACAAGAGATAATAATATTGATTTGGAAAGTTTGGAGGTTAAACTTCGAGAACTTGAAGCTGAGCTACTTGAGATTAATGCCAATAATGAGAAGTTGCAACATAGTTACAATGAGCTATTAGAGTATAAGCTTGTTCTTGAGAAGGTAGGTGAGTTTTTCTCTTCTGCACAAAAGACTGCTGTAGCTCACCAGAGAGAGCTTCAAAATCAGACAACTGCTGAAGGAACTATTGACAGCCCATTATTACTGGAGCAAGAGACAACAACATATCCATTAAAGCAGGTTAAGCTGGGGTTTATCAGTGGTCTTGTTCATAGAGAAAAATCAATTCCTTTAGAAAGAGTTCTATTTCGTGCTACTAGGGGAAATGTGTTTCTGAAGCAAACTGCGGTTGAACATCCTGTTCTCGATCCTTTGACAGGAGAGAAGGTTGATAAAAATGTATTTGTTGTCTTTTATTCTGGAGAGAGAGTTAGCAGCAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCGGATGACTTGAGTAAACAGTTTCATATTATAACAGAGGTATCAGGAAGACTTTCAGAGTTGAAGACTACCATAGATGTTGGACTGCTTCACTGGAGAACTCTATTGCAGACAATTGGTTATCACTATGAGCAGTGGAGCCTCCTGTTGAAGAAAGAGAAATCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACGAAGAAGTGTCTCCTTGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAGTGAGATTCACAAAGTACTGCAACAGGCAACCCTGGACAGTAGCTCTCAAGCCGGGGCTATATTTCAGGTTTTACAGACAAAGGACTCACCACCTACCTATTTTTGCACGAACAAATTTACTTCTCCTTTTCAAGAAATTGTAGATGCCTACGGAGTTGCCAAGTACCGGGAGGCAAATCCCGGTGTGTACACAATCATCACATTTCCATTTCTTTTTGCTGTAATGTTTGGTGATTGGGGACATGGCATATGCTTATTGCTGGCGGCTTTGTATTTCATAATCCGAGAGAGAAAATTTTCTAGTCAGAAACTTGGAGACATATTAGAAATGGCCTTTGGTGGACGCTATGTTATTTTGATGATGGCACTCTTCTCAATCTACACCGGGTTGATTTACAATGAATTTTTTTCCATTCCATTTGAACTATTTGGACCATCTGCCTATAGATGTCGTGATCCCTCATGCAGGGATGCTACAACAATAGGTTTAATAAAAGTGCGTGACACATATTCATTTGGTTTGGATCCTAAATGGCATGGTTCTAGGAGTGAACTGCCATTTCTTAACTCTTTGAAGATGAAGATGTCAATCCTACTGGGAGTGTCCCAAATGAATCTTGGGATCATATTGAGTTACTACAATGCAAAATACTTTGAAAACAACATAAATATTAGGCACCAGTTTGTTCCCCAGATGATATTCTTGAACAGTCTGTTTGGCTACCTTTCACTTCTCATAATTGTCAAGTGGTGCACTGGTTCAAAGGCTGACCTGTATCATGTGATAATATACATGTTCCTAAGTCCAACAGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAGAAGTTTCTTCAACTTGTGTTGCTACTGTCAGCACTTGTTGCTGTACCATGGATGTTACTTCCAAAGCCCTTTCTCCTGAAGAAACAACACCAAGAAAGGCATCAAGGTCAGTCTTACTCTTTGCTCTACAGCGCGGAAGAAGATCCTCTTGAACCAGAGTCCCAAAGTATTCCCCTTGACCATGAGGATTTTGAGTTCAGCGAGGTTTTTGTGCACCAACTTATACATACGATCGAATTTGTGCTTGGAGCTGTTTCTAATACTGCTTCATATCTACGTTTATGGGCCCTCAGTCTAGCTCATTCAGAGTTGTCAAGTGTTTTCTACGACAAAGTTCTACTTCTGGCTTGGGGGTTTAACAACACCATTGTTCTCATTGTTGGCATTGTTGTGTTTATAAGTGCAACTGTTGGTGTGCTACTGTTAATGGAAACGCTAAGTGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTACGAGGGAGATGGTTACAAGTTTGACCCATTTTCATTTGCATTAATTGCTGATGAGGATGAACTGTAG 2460 0.402 MRNEGCFPTMDLLRSEPMQLAQLIIPIESAHRSISYLGDLGLFQFKDLNADKSPFQRTYAAQIKRCGEMARTLRLFKEQMVKAGVSPSTLSTRDNNIDLESLEVKLRELEAELLEINANNEKLQHSYNELLEYKLVLEKVGEFFSSAQKTAVAHQRELQNQTTAEGTIDSPLLLEQETTTYPLKQVKLGFISGLVHREKSIPLERVLFRATRGNVFLKQTAVEHPVLDPLTGEKVDKNVFVVFYSGERVSSKILKICDAFGANRYPFSDDLSKQFHIITEVSGRLSELKTTIDVGLLHWRTLLQTIGYHYEQWSLLLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSEIHKVLQQATLDSSSQAGAIFQVLQTKDSPPTYFCTNKFTSPFQEIVDAYGVAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLAALYFIIRERKFSSQKLGDILEMAFGGRYVILMMALFSIYTGLIYNEFFSIPFELFGPSAYRCRDPSCRDATTIGLIKVRDTYSFGLDPKWHGSRSELPFLNSLKMKMSILLGVSQMNLGIILSYYNAKYFENNINIRHQFVPQMIFLNSLFGYLSLLIIVKWCTGSKADLYHVIIYMFLSPTDDLGENQLFVGQKFLQLVLLLSALVAVPWMLLPKPFLLKKQHQERHQGQSYSLLYSAEEDPLEPESQSIPLDHEDFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIVGIVVFISATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFDPFSFALIADEDEL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0085 819 PANTHER VACUOLAR PROTON ATPASES 10 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal4g0085 819 Pfam V-type ATPase 116kDa subunit family 36 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal4g0085 819 PIRSF ATP6V0A1 8 819 IPR026028 GO:0000220|GO:0046961
Lal4g0085 819 Coils Coil 92 126 - -
Lal4g0085 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 10 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0085 Lal-Chr4 513851 520844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0085 10 818 Primary Pumps ATPases(2) AT4G39080 74.042 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0085 K02154 - gmx:100805813 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0085 4 513851 520844 Lal4g0085 4 513851 520844 ECH