Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0072 ATGGCTTTAAGAAAATCGATTAGACACCCTCAAAAAGCACTTATCAAGAAAATCCTCAAGAGATGCTCAAGTTTGGGGAAGAAACAAGAAGACTATGATGATCAAGGAATCCTTTTGGACGTGCCAAAGGGTCACTTTGTTGTATACGTTGGAGAAAACAGAAGCAGACATATTGTTCCTATTTCTTTTCTAAGTCACCCAGAGTTTCAAAACTTGCTTCATCAAGCAGAAGAAGAGTTTGGCTTTGATCATGAAAGGGGTCTCACAATTCCTTGCCAAGAACATGTTTTTGAGTCTCTTACATCCATGCTCAAATAA 318 0.3836 MALRKSIRHPQKALIKKILKRCSSLGKKQEDYDDQGILLDVPKGHFVVYVGENRSRHIVPISFLSHPEFQNLLHQAEEEFGFDHERGLTIPCQEHVFESLTSMLK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0072 105 Pfam Auxin responsive protein 35 104 IPR003676 GO:0009733
Lal4g0072 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
Lal4g0072 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0072 Lal-Chr4 423699 424016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0072 40 100 Calmodulin-binding Proteins AT3G43120 55.738 3.90e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0072 K14488 - mnt:21399104 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0072 4 423699 424016 Lal15g1507 15 17201197 17201502 ECH
Lal4g0072 4 423699 424016 Lal23g1461 23 14967820 14969256 ECH
Lal4g0072 4 423699 424016 Lal4g0072 4 423699 424016 ECH
Lal21g0118 21 811081 811404 Lal4g0072 4 423699 424016 LSH