Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0044 ATGTCTGCGATGTCTGCTCTCCGCCGCGAAGGGAGGCGTTTGGCCCCTCTCATCCATTCTCAACCCATTCCATCTCCTCTCACCTCTTCCTCTCTAGATCAAGCCCCCATTGGAGCTCGATCTATTTCAACTCAAATAGTCAGAAATCGTATGAAGAGTGTTAAGAATATCCAGAAAATCACAAAGGCAATGAAGATGGTTGCAGCCTCAAAGCTACGAGCTATTCAGACCAGAGCCGAAAATTCACGTGGCCTCTGGCAACCATTTACTGCCCTTCTGGGTGACACCCCTAGTGTTGATGTCAAGAAAAATGTTGTTGTTACCATTTCTTCAGACAAAGGTCTCTGTGGTGGAATCAATTCCACATCTGTCAAGATAAGCAGGGGTTTGGGTAGATTGAACTCTGGGCCTGATAAAGAGACAAAGTATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGATACGTGACTCAAAGAAAGACATTGAGATCATCATAACTGAGTTGCAGAAAAATCCTTTGAACTATACTCAGGTGTCTGTCCTGGCTGATGACATTCTAAAGAATGTTGAGTATGATGCCTTAAGGATTGTGTTCAACAAGTTTCAATCAGTTGTCTCGTTTCTTCCAACAGTGTCAACTGTATTATCTCCTGAGATTGTGGAGAGAGAGGCTGAAGCTGGGGGAAAGCTTGGAGAGCTGGACTCATATGAGATTGAAGGTGGTGATACAAAATCAGAAATTCTCCAGAATCTTGCTGAGTTCCAGTTTTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCGAGGATGTCTGCCATGGACAGCTCTAGCAGGAATGCTGGAGACATGCTCGACCGTCTCACCCTCACTTATAACAGAACTCGTCAAGCATCAATTACCACCGAATTGATTGAGATTATCTCTGGAGCTTCTGCACTGACTGGTTAA 969 0.4469 MSAMSALRREGRRLAPLIHSQPIPSPLTSSSLDQAPIGARSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVVVTISSDKGLCGGINSTSVKISRGLGRLNSGPDKETKYVILGEKAKAQLIRDSKKDIEIIITELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFQSVVSFLPTVSTVLSPEIVEREAEAGGKLGELDSYEIEGGDTKSEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALTG 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0044 322 PRINTS ATP synthase gamma subunit signature 101 120 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 PRINTS ATP synthase gamma subunit signature 193 210 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 PRINTS ATP synthase gamma subunit signature 267 286 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 PRINTS ATP synthase gamma subunit signature 298 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 Pfam ATP synthase 45 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 PANTHER ATP SYNTHASE GAMMA CHAIN 3 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 43 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 PANTHER BNAA05G10580D PROTEIN 3 320 - -
Lal4g0044 322 ProSitePatterns ATP synthase gamma subunit signature. 306 319 IPR023632 -
Lal4g0044 322 Gene3D - 67 279 - -
Lal4g0044 322 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 45 320 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 CDD F1-ATPase_gamma 43 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal4g0044 322 PIRSF ATP_synthase_gamma 17 320 - -
Lal4g0044 322 Gene3D ATP synthase, gamma subunit, helix hairpin domain 47 317 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal4g0044 Lal-Chr4 265692 269564 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0044 47 320 Primary Pumps ATPases AT1G15700 29.846 1.13e-27 109