Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0020 ATGTCTGAGGAGACAAACAAGACAGGATCGCCATTTCAAAATGGTTCCATTGTCAATAACATACCACCCTTCACTGCTGAACCACTACGTTCAATTGCAACGCATGTTATCCTTCGGAACGTCGGAGAGTGTATCAGTACGGCGATAATGAACCTTTCACGGGATCTTGGCAGAAATATTTGCGTAGTGGCAGCCAATAGAGAATTTTCTCGAGTGAGACTACGCCTTGCCACAAATGAATATGTGACTTATGAGGGACGATTTATGATCCAGTCACTGAGTGGTTCATTGCTTTTGTTTGATGGAAATGGTCCATCGGGTCGAAGTGGTGGATTAAATAGAGCTGGGCTGTTTTATCCTGGGGACGGCGTGGTTGATAGTCTGCTTGCACCTAGAGGCAGTACCACGAAACGTCTTAAAGAGAGCGACCTGGTCGTGACTCAGCCAGTAGTCTTGTTGAGCTTCCCAGGAGAATTTTGCAATGCATCCAAGAAGGCAAAAGAAAAAGGAAATTCATCTGCCCCACCAAATTAA 534 0.4532 MSEETNKTGSPFQNGSIVNNIPPFTAEPLRSIATHVILRNVGECISTAIMNLSRDLGRNICVVAANREFSRVRLRLATNEYVTYEGRFMIQSLSGSLLLFDGNGPSGRSGGLNRAGLFYPGDGVVDSLLAPRGSTTKRLKESDLVVTQPVVLLSFPGEFCNASKKAKEKGNSSAPPN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0020 177 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 33 113 - -
Lal4g0020 177 SUPERFAMILY AF0104/ALDC/Ptd012-like 35 104 - -
Lal4g0020 177 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 113 IPR039605 GO:0003680
Lal4g0020 177 ProSiteProfiles PPC domain profile profile. 29 156 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0020 Lal-Chr4 135084 142551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0020 35 168 AT-hook Motif Nuclear Localized (AHL) Family AT5G46640 36.765 3.72e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0020 - - lang:109326429 157.147