Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0006 ATGGGAAGGTCACCTTGTTGTGAGAAAGCACACACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGACTCATAGCTTATATAAGATCAAATGGTGAGGGATGTTGGCGCTCTCTCCCCAAAGCAGCTGGCCTTCTCCGTTGTGGTAAGAGTTGTCGTCTCCGTTGGATCAACTACCTCCGTCCTGACCTCAAACGTGGCAATTTTACCCAACAAGAAGATCATCTCATCATTAAACTTCATAGTCTCCTTGGTAACAAGTGGTCTCTCATAGCTGGAAGATTGCCCGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATTAGAAGAAAGCTTATGAGAAGAGGAATTGACCCTGCAACTCATAGACCTCTCAACAACTCTTCTACTTCTGCTACAACCCTCACACTTTCATCTTCAGCCATTGCTAAACAAGATGACGATTCCAAAGGAGTCATCTTAGAACGCTGCACAGACTTGAACCTTGAACTAACCATTAGTCCTCCCCATCATCATATTTACTCATTCAACACAACTACTCCTCCCCATCATCATATTCACTCATTCAACACAACTACTCCTCCCCGTCATCATATTCACTCATTCAACACAACCCTTTGCTTTTCATGTAGTTTGGGTTTGCAGAATAGCAAGGATTGTAGCTGTGGGATTCATGGTGGCAGTAACATTGCCATTGCCAACACTACTACGTCTACTTCTACTTCTAGTAATGGGGCCAACACTACTGCTCCTGGTTATGATTTCTTGGCCTTCAAAAACCAATGTTTTGTATTACAGAAGCTTGCAAATGAAACGAAATAA 834 0.4197 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRSNGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQQEDHLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLMRRGIDPATHRPLNNSSTSATTLTLSSSAIAKQDDDSKGVILERCTDLNLELTISPPHHHIYSFNTTTPPHHHIHSFNTTTPPRHHIHSFNTTLCFSCSLGLQNSKDCSCGIHGGSNIAIANTTTSTSTSSNGANTTAPGYDFLAFKNQCFVLQKLANETK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0006 277 CDD SANT 69 112 IPR001005 -
Lal4g0006 277 SMART sant 66 114 IPR001005 -
Lal4g0006 277 SMART sant 13 63 IPR001005 -
Lal4g0006 277 CDD SANT 16 61 IPR001005 -
Lal4g0006 277 Gene3D - 14 66 - -
Lal4g0006 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lal4g0006 277 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lal4g0006 277 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 231 - -
Lal4g0006 277 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lal4g0006 277 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lal4g0006 277 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lal4g0006 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lal4g0006 277 Gene3D - 69 139 - -
Lal4g0006 277 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lal4g0006 277 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0006 Lal-Chr4 79213 80775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0006 1 265 MYB Transcription Factor Family AT4G38620 50.836 1.00e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal4g0006 Myb_DNA-binding 7.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0006 K09422 - jre:109006592 333.183