Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1581 ATGTATAGCATTGTGAATCTCTTGTTCTTTTCTATTATTTTGTTCAATGCTATTCATGCATCTAACCAAGCTTCATCATCATCACCATCACTATTGATCTTGGGTTGTGGCTTAGACAAAGGTAGCGAAAAAGATGTTGATGGAAGAACATGGGGTCCAGATGATAAGTTCCTACAACCAGGTGGCAAGTCCATAAAATCCAAAGCCTCTTTCCAAGACCCTTCTCTTTTGGATGTGGTTCCATACATGTCAGCAAGAGTTTTCACATCTGAAACATCATACAAATTCCTTGTCCATCCGGATAAGCGTTATTGGCTAAGGCTTCATTTTTACCCTTCTATTTATGGCAGTTACAACCCCTCAGAATCATATTTCTCAGTCATAGCAAATGGTGCTCTTACCCTTCTCTCAAACTTTAGTGCCTCAATCTCTTGTCAGGCCCTCTCACAAGCTTACCTTGATAGAGAGTATTCCCTTGCTCCATTGAACACAGATTCTTTGACTCTCACCTTTAAGCCTAATGACAAGTCTTTTGGATTTATCAATGGGATTCAACTGATTGAAATGCCTGAGTTGTTTGACTCTTTTGCTTCATTGGTTGGGTATGCTGACCAAACTGTTGAAGTCAAAAGTTTGCATTTGCAAACCATGTTTAGGCTCAATGTTGGTGGACAATACATATCTCCAAAACAAGATTCTGGTCTTTCTAGGATGTGGTATGATGACACACCTTACATATATGGTGCAGCCACTGGTGTCACCAACCAAGCTGAAAAGGATGTGAAAATCAACTACCAAACCATGTCAACATACATTGCTCCTACTAATGTCTATTCCACATCAAGATCAATGGGGAATGATAAAAATATGAATATGGGATATAATCTCACATGGATTTTCCAAGTTGATCCAAATTCTATGTACCTTGCAAGGTTGCATTTTTGTGATTACTATTATTCCAAAGTCAATGAGATTGTTTTCAATATCTTCCTTAACAACCAAACAGCACAAACTCAAGCTGATGTGATAGGATGGACGGGAGGTAAAGGTGTTCCAACTTACAAAGACTATGTGATATATGTGCAAGATGATGCAGGTGAAGATCAACTTTGGCTTGCATTACATCCAGCACCGGATTCGAAGCCCGAGTTTTATGATGCATTGCTCAATGGAGTGGAGATATTCAAGGTCAACGACACAAACTTGTCTGGCCCTAATCCTCAGCCTTCAGACATGCTCATGAAGGCTGAAGAAGTGGAAAGAAAATTTGAAACCCACAAAGGGTATAATAAGACTGTTGTTGGTAGTGCTGCTGGAGGTGCTGCTGGTTTCGCCTTAGTGGCTGCAATAGTATGTGTTGCTGTGTACAGCAAGAAGAAGAGAGTTCCAGGATCAGACACTCATACAAGCTGGTTGCCAATCTATGGAATCTCACAAACAACCGGTACCAAATCCACCTTGTCAGAGAGGAGTACTAATAGTGCCAACTTAACTGCCATGGCTCAAGGTCTTTGTAGATACTTCTCCTTACAAGAGATTAAGCAAGCAACTAAGAATTTTGATGAGCCTAATGTTATTGGAGTTGGAGGATTTGGAAAGGTTTATAAAGGTGTTATCGATAATGGGGTTAAAGTGGCAGTCAAAAGGTCTAATCCACAATCAGAACAAGGAGTTAATGAATTCCAGACTGAGATTGAGATGCTTTCCAAGTTGAGACACAAGCATTTGGTGTCATTGATTGGATTTTGTGAGGAAGATGATGAGATGTGTTTGGTTTATGACTACATGGAACGCGGCACCTTTAGAGAGCATTTGTATAAGGGTAACAAACCTTTGTCTACTCTATCATGGAAGGAAAGGTTGGAGATATGCATTGGATCTGCAAGAGGGCTTCATTACCTTCACACTGGTGCTAAGTACACCATCATCCATAGAGATGTCAAAACAACAAACATTCTGATTGATGAGAACTGGTCTGCTAAGGTTTCAGATTTCGGCTTGTCGAAAACTGGTCCAAACATGAACCAAGGTCATGTCAGTACTGTGGTGAAAGGTAGTTTTGGATACTTGGATCCTGAGTATTTCAGAAGGCAACAATTGACTGAGAAATCTGATGTATACTCATTTGGTGTGGTCTTGTTTGAAGCACTGTGTGCAAGGCCTGCTTTGAATCCAAGCCTTCCAAAGGAACAGGTTAGTCTTGCAGACTGGGCATTGATATGTAAAAGAAAAGGAATATTGGAGGATATTATTGACCCTTATATCAAAGGAAAGATCAACCCTGAAAGCTTGAAGAAGTTTGCAGACACTGCAGAGAAGTGCTTGTCTGATCACGGAATTGATCGTCCTTCCATGAATGATTTACTGTGGAATCTTGAGTTTGCTCTGAACCTGCAAGAGAATCCTGATGGTTCAACTAAGCCTGTGGCACGTGTTACTGATGAAAGGGAGTTTGAAGATATAAGCTTGGGAAATAATGACATGGCTAACCATTATAAGAACTTGAGCCTTGGAAGTGATGAGCATGAACTTAGCACTTAG 2541 0.4042 MYSIVNLLFFSIILFNAIHASNQASSSSPSLLILGCGLDKGSEKDVDGRTWGPDDKFLQPGGKSIKSKASFQDPSLLDVVPYMSARVFTSETSYKFLVHPDKRYWLRLHFYPSIYGSYNPSESYFSVIANGALTLLSNFSASISCQALSQAYLDREYSLAPLNTDSLTLTFKPNDKSFGFINGIQLIEMPELFDSFASLVGYADQTVEVKSLHLQTMFRLNVGGQYISPKQDSGLSRMWYDDTPYIYGAATGVTNQAEKDVKINYQTMSTYIAPTNVYSTSRSMGNDKNMNMGYNLTWIFQVDPNSMYLARLHFCDYYYSKVNEIVFNIFLNNQTAQTQADVIGWTGGKGVPTYKDYVIYVQDDAGEDQLWLALHPAPDSKPEFYDALLNGVEIFKVNDTNLSGPNPQPSDMLMKAEEVERKFETHKGYNKTVVGSAAGGAAGFALVAAIVCVAVYSKKKRVPGSDTHTSWLPIYGISQTTGTKSTLSERSTNSANLTAMAQGLCRYFSLQEIKQATKNFDEPNVIGVGGFGKVYKGVIDNGVKVAVKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMERGTFREHLYKGNKPLSTLSWKERLEICIGSARGLHYLHTGAKYTIIHRDVKTTNILIDENWSAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLADWALICKRKGILEDIIDPYIKGKINPESLKKFADTAEKCLSDHGIDRPSMNDLLWNLEFALNLQENPDGSTKPVARVTDEREFEDISLGNNDMANHYKNLSLGSDEHELST 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1581 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lal3g1581 846 Gene3D Transferase(Phosphotransferase) domain 1 596 812 - -
Lal3g1581 846 Gene3D - 33 190 - -
Lal3g1581 846 Gene3D - 212 398 - -
Lal3g1581 846 SUPERFAMILY Protein kinase-like (PK-like) 497 795 IPR011009 -
Lal3g1581 846 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1581 846 Pfam Protein kinase domain 524 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1581 846 PANTHER OS07G0166700 PROTEIN 21 838 IPR045272 GO:0004714|GO:0006468
Lal3g1581 846 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1581 846 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 838 - -
Lal3g1581 846 CDD STKc_IRAK 526 793 - -
Lal3g1581 846 Pfam Malectin-like domain 35 397 IPR024788 -
Lal3g1581 846 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Lal3g1581 846 Gene3D Phosphorylase Kinase; domain 1 479 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1581 Lal-Chr3 21539365 21541905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1581 32 827 Receptor kinase-like Gene Family AT3G51550 53.780 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal3g1581 Malectin_like 6.2e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1581 - - mtr:MTR_7g115300 1316.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1581 3 21539365 21541905 Lal18g0229 18 1907078 1909693 LSH
Lal3g1581 3 21539365 21541905 Lal13g0710 13 4612978 4615488 PCT
Lal3g1581 3 21539365 21541905 Lal24g0544 24 3833963 3836569 PCT
Lal13g0710 13 4612978 4615488 Lal3g1581 3 21539365 21541905 PCT
Lal24g0544 24 3833963 3836569 Lal3g1581 3 21539365 21541905 PCT