Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1568 ATGATGAAGAATGAGAAGCTTCGTGGATGGGGTGAAGAGATAAGAGATCCTTGGAGAAGAAGAAGAGTGTGGCTTGGTACTTATGACACTGCTCAAGAAGCTGCTATGGTTGGTGGCTCTGAGGAAGCATTTGTAGCTGCAAAATCAATATTCTTTTCAATGGGTAAAAGTGCAAAATATTGTGGAGGACCAGGAAGTGATTCTGTAAGTTACATACTTCTATTTAGGATGGAGTTATTGACACTTACTTTGAAAAAAATATTTAACTGCTCCAGTGCTCGCTGTTGGAGCAGTGATGCTTACAACCCAGTTCCTGGAGTAATGGAAGGGGTTCCCTCTTCAAGAGATTATAATGGAAGATTTGCATCCAAGCTTATGGTAAATATACTAAACTTGCACATATTCTTTTACCATTTGGAATTATATATAGTAAGAAAAAAGTCATTACATTAG 453 0.3775 MMKNEKLRGWGEEIRDPWRRRRVWLGTYDTAQEAAMVGGSEEAFVAAKSIFFSMGKSAKYCGGPGSDSVSYILLFRMELLTLTLKKIFNCSSARCWSSDAYNPVPGVMEGVPSSRDYNGRFASKLMVNILNLHIFFYHLELYIVRKKSLH 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1568 150 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE, MITOCHONDRIAL 34 132 - -
Lal3g1568 150 Gene3D AP2/ERF domain 3 36 IPR036955 GO:0003700|GO:0006355
Lal3g1568 150 SUPERFAMILY DNA-binding domain 8 37 IPR016177 GO:0003677
Lal3g1568 150 ProSiteProfiles AP2/ERF domain profile. 1 35 IPR001471 GO:0003700|GO:0006355
Lal3g1568 150 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED 34 132 - -
Lal3g1568 150 Gene3D - 37 135 IPR013328 GO:0016491
Lal3g1568 150 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 84 130 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1568 Lal-Chr3 21458571 21461592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1568 10 37 AP2-EREBP Transcription Factor Family AT4G11140 75.000 1.39e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1568 K23146 - gmx:100814043 129.413