Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1559 ATGGTTGGATCAAGAAGTTATACCTTGTATAGGCATGTTTACGTTAGGAATGGCTTGGGCAATGGTACTCTTTTGACACATCATTGTAAATCTAAAGATGATGACTTGGGTGTTAGGACTCTGAACTTCACATGGAATGGAAAATTACACTGGTTTACCATTTATGATTATTCTTTAGATAATAACTATTGCTATGACTGCTATTGGAGCATAAAGCCAGATCATCCATGTAGGTTCAATTCTAAAACCTTTAATTATGATCTTTGCCCTTATGTATACCGTTGA 285 0.3509 MVGSRSYTLYRHVYVRNGLGNGTLLTHHCKSKDDDLGVRTLNFTWNGKLHWFTIYDYSLDNNYCYDCYWSIKPDHPCRFNSKTFNYDLCPYVYR 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1559 94 PANTHER S-PROTEIN HOMOLOG 2 11 41 - -
Lal3g1559 94 PANTHER S-PROTEIN HOMOLOG 2 42 88 - -
Lal3g1559 94 Pfam Plant self-incompatibility protein S1 42 89 IPR010264 -
Lal3g1559 94 Pfam Plant self-incompatibility protein S1 12 43 IPR010264 -
Lal3g1559 94 PANTHER - 11 41 IPR010264 -
Lal3g1559 94 PANTHER - 42 88 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1559 Lal-Chr3 21377011 21377430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1559 13 89 Carbohydrate Esterase AT3G16970 33.981 5.37e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1559 - - cic:CICLE_v10006406mg 76.2553