Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1550 ATGGAAGAAGAACTACGTTCGAAAATTGAAAGAACGGTGTTGGAGATAGTGAAGCAATCGAATATGGAAGATTCAACTGAGTTCACCATCCGAGTTGCTGCCTCTGATCGACTCGGAATTGATCTCTCTCTTCCCGAACGGAAGCAACTTGTTCGAACCGTTATTGAGTCTTATCTTCTTTCTGTTGCCGACGGAATCAAGAACCACACGGTGGCACCGGAATCGAATGAAATTACAATGAACACGATTGTTGTACAAGATTCCTCAGAGATGCTGGACTTGAAGAAGAATATGAAGATGAAGGAGGAGAACTCAGAACGCATTGTTTGCCAGTTGTCAAACAGGAGGAATGTGTCCGTTGGAAATTTTAAAGGGTCAACATTGGTGTCAATAAGAGAGTTTTATTGTAAAGATGGAAAACAACTTCCTGGTCCTAAAGGGATAAGTTTATCTACTGAACAGTGGTTAGCCTTCAAGAAGAGCGTACCTGCTATTGAGGAAGCTATCACAAAGATGGAAAGAAAGATGGGGTGA 534 0.4195 MEEELRSKIERTVLEIVKQSNMEDSTEFTIRVAASDRLGIDLSLPERKQLVRTVIESYLLSVADGIKNHTVAPESNEITMNTIVVQDSSEMLDLKKNMKMKEENSERIVCQLSNRRNVSVGNFKGSTLVSIREFYCKDGKQLPGPKGISLSTEQWLAFKKSVPAIEEAITKMERKMG 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1550 177 SUPERFAMILY ssDNA-binding transcriptional regulator domain 109 171 IPR009044 GO:0003677|GO:0006355
Lal3g1550 177 PIRSF RNA_polymII_KELP 1 176 IPR017415 -
Lal3g1550 177 Pfam Transcriptional Coactivator p15 (PC4) 110 160 IPR003173 GO:0003677|GO:0006355
Lal3g1550 177 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 175 - -
Lal3g1550 177 Pfam DEK C terminal domain 6 59 IPR014876 -
Lal3g1550 177 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 175 IPR045125 GO:0003713|GO:0060261
Lal3g1550 177 Gene3D Transcriptional Coactivator Pc4; Chain A 99 176 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1550 Lal-Chr3 21260314 21269251 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lal3g1550 DEK_C 9.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1550 - K25815 lang:109345725 288.115