Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1536 ATGGGTGGTAGTGAGAAGAATTTTAAGTATTTTCATTTGAATAGCCAAGTACATAACCAACAATATCACTATGGGAAAAAGCAACATGAGAATAGACATGTTCCAAAAGGATGTCTTGCAATTAAGGTAGGTCAAGGAGAAGAACAACAAAGGTTTGTAGTGCCAATTATATACTTCAATCACCCTCTCTTCATACAACTACTCAAGGAGGCAGAAGAAGAATATGGTTTTGACCATAAAGGAACCATAGAAATCCCTTGTCATGTGGAAGAATTCACCAATGTTAGAGGCTTGATTGATAGAGAAAAATCCCTTCACCATAATCATCATATCGGTTGTTTTGGCTTCTCGTGA 354 0.3672 MGGSEKNFKYFHLNSQVHNQQYHYGKKQHENRHVPKGCLAIKVGQGEEQQRFVVPIIYFNHPLFIQLLKEAEEEYGFDHKGTIEIPCHVEEFTNVRGLIDREKSLHHNHHIGCFGFS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1536 117 PANTHER SMALL AUXIN-UP RNA-RELATED 23 110 - -
Lal3g1536 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 110 IPR003676 GO:0009733
Lal3g1536 117 Pfam Auxin responsive protein 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1536 Lal-Chr3 21057473 21058445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1536 33 92 Calmodulin-binding Proteins AT3G43120 55.000 2.54e-16 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1536 3 21057473 21058445 Lal3g1536 3 21057473 21058445 ECH
Lal5g0057 5 621270 621620 Lal3g1536 3 21057473 21058445 LSH