Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1535 ATGGGTCAGTGTTACGGCAAGACCAACCCGAATCCCGAAACTGAACATGCTCCTAACGCAACCGAAACCTCCACCGGAATTTCCGGTTCCCGGTCACCTATTCCGGTAGCTAGCGTCGGTAACGGTTACCAGTCAGTGAAGAACACGCCGGCGAGGTCGTCGTCATCTCAGGCGAGCCTATGGCCGAGTCCGTACCCTCAAGGGGAGGGGGTGTCACCGTCGCCGGCGAGGGGTACGACGCCGAGAAGGTTTTTCCGGCGGCCGTTTCCACCGCCGTCTCCGGCGAAGCATATAAAGGCGTCGTTGGCGAAGAGGCTTGGGAAGAAGGTGGAGAAGGAGGGGATAATACCGGAGGAGGGGCGGGCGGCGGCGTCGACGGCGACGGCGGTGGGGGAAGGGGAGGAGCAAGTGCTGGATAAGAGTTTTGGGTATGGGAGGAATTTTGGAACGAAGTATGAATTGGGAAAGGAAATTGGAAGAGGGCATTTTGGTCATACTTGCTATGCTAAGGGTAAGAAGGGTGAGCTCAAAGATCAACCTCTTGCTGTTAAAATCATTTCAAAGGCTAAGATGACCACAGCGATAGCAATTGAAGATGTTCGTAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATGAGCATCTCATCAGATTTCATGATGCTTGTGAAGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGCGGGGAGCTACTTGACCGAATTTTGTCAAGGGGAGGAAGGTATACAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATTCTCAGTGTGGTTGCCTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACTTGAAGCCCGAGAATTTCCTCTTCACTTCTAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTATCTGACTTCATCAAGCCTGATGAACGACTGAATGACATTGTTGGAAGTGCGTATTATGTTGCACCTGAGGTCCTCCACAGATCATATAGTGTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTACATTTTACTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTTCTGTGCTCAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCATCTCTATCTCCAGAGGCCAAGGACTTCGTAAAAAGACTCCTAAACAAGGACTACAGGAAAAGAATGTCTGCTGCCCAAGCTCTAGCTCATCCTTGGTTGAGGGACAACACCCACCCTATCCCTTTGGATATATTAATTTATAAATTAGTGAAGTCTTATCTTAATGCAACACCATTCAAACGTGCAGCAATGAAGGCCCTTTCAAAAACATTGACAGAGAATGAGTTGGTGTATCTTGGAGCACAGTTCAAATTATTGGAACCAAGTAGAGATGGATATGTCTCCCTTGAAAATTTCAAAATGGCTCTTGCACAACATGCAACCAATGCTATGAGGGAGTCCAGGGTTCTTGACATCGTACACATGATGGAACCACTTGCCTATAGAAAGATGGATTTTGAAGAATTTTGTGCTGCTGCAACTAGCACATATCAATTGGAAGCACTTGATAGATGGGAAGATATTGCCAACACTGCATTTGAACATTTTGAGAGAGAGGGCAACCGTGTCATAACGATGGAAGAATTAACAAGAGAGTTGAATCTTGGTCCTTCAGCTTATTCAATTCTCAAAGACTGGATAAGGAATGATGGAAAGCTTAATTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCAGAACTTCAAACTCAAGAAACCGTTAG 1812 0.4564 MGQCYGKTNPNPETEHAPNATETSTGISGSRSPIPVASVGNGYQSVKNTPARSSSSQASLWPSPYPQGEGVSPSPARGTTPRRFFRRPFPPPSPAKHIKASLAKRLGKKVEKEGIIPEEGRAAASTATAVGEGEEQVLDKSFGYGRNFGTKYELGKEIGRGHFGHTCYAKGKKGELKDQPLAVKIISKAKMTTAIAIEDVRREVKILKALSGHEHLIRFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIKPDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFDDLPWPSLSPEAKDFVKRLLNKDYRKRMSAAQALAHPWLRDNTHPIPLDILIYKLVKSYLNATPFKRAAMKALSKTLTENELVYLGAQFKLLEPSRDGYVSLENFKMALAQHATNAMRESRVLDIVHMMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIANTAFEHFEREGNRVITMEELTRELNLGPSAYSILKDWIRNDGKLNLLGYTKFLHGVTLRTSNSRNR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1535 603 Pfam Protein kinase domain 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1535 603 Gene3D Phosphorylase Kinase; domain 1 146 241 - -
Lal3g1535 603 CDD STKc_CAMK 151 413 - -
Lal3g1535 603 MobiDBLite consensus disorder prediction 1 97 - -
Lal3g1535 603 ProSitePatterns Protein kinases ATP-binding region signature. 158 184 IPR017441 GO:0005524
Lal3g1535 603 Gene3D Transferase(Phosphotransferase) domain 1 242 421 - -
Lal3g1535 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lal3g1535 603 PANTHER CDPK-RELATED KINASE 3 66 596 - -
Lal3g1535 603 SMART serkin_6 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1535 603 MobiDBLite consensus disorder prediction 1 63 - -
Lal3g1535 603 Gene3D - 422 593 - -
Lal3g1535 603 ProSiteProfiles Protein kinase domain profile. 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1535 603 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 596 - -
Lal3g1535 603 SUPERFAMILY EF-hand 440 591 IPR011992 -
Lal3g1535 603 SUPERFAMILY Protein kinase-like (PK-like) 142 438 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1535 Lal-Chr3 21048084 21056695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1535 23 597 EF-hand Containing Proteins AT3G50530 59.150 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal3g1535 Pkinase 4.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1535 - - gmx:100796256 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1535 3 21048084 21056695 Lal3g1535 3 21048084 21056695 ECH