Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1534 ATGGTTCTCAAGACGGAGCTTTGCCGATTCAGTGGTGCCAAGATATACCCTGGGAGAGGCATCAGGTTTATTCGTGGCGATTCTCAGGTCTTCCTGTTTGTCAACTCAAAATGCAAGAGATATTTCCACAACCGTTTGAAGCCATCAAAGCTTACCTGGACCGCCATGTACAGGAAGCAACACAAGAAGGACGCTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAAAAAGCCATACTCTAGGTCCATTGTTGGTGCTACTTTGGAAGTTATCCAGAAAAGAAGAACCGAAAAGCCGGAGGTTCGAGATGCTGCCAGGGAGGCTGCTCTTCGTGAAATTAAGGAGAGGATCAAGAAAACAAAGGACGAGAAGAAGGCTAAGAAGGCAGAAGTAGTGGCTAAGTCACAAAAAACAGGCAAAGGAAATGTTTCAAAGGGTGCCGCGCCAAAAGGTCCTAAACTCGGCGGTGGAGGTGGGAAACGTTGA 492 0.4776 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVVAKSQKTGKGNVSKGAAPKGPKLGGGGGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1534 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Lal3g1534 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Lal3g1534 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 IPR000988 -
Lal3g1534 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Lal3g1534 163 Coils Coil 112 132 - -
Lal3g1534 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Lal3g1534 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Lal3g1534 163 SMART 4TRASH 8 46 IPR011017 -
Lal3g1534 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 - -
Lal3g1534 163 MobiDBLite consensus disorder prediction 119 163 - -
Lal3g1534 163 Gene3D - 69 138 - -
Lal3g1534 163 MobiDBLite consensus disorder prediction 119 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1534 Lal-Chr3 21043274 21045155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1534 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 4.28e-87 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1534 K02896 - dcr:108225184 243.047