Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1524 ATGGATTTGAGTAAACAAGTTAAAGGGTATTCTGATAGCAGAGAAGAAGAGGAATTAGATGAGGAAGCTTCAGAAGCAACAGCAGAAGAAATTATCAGAATCTCAAGAGAAGAAGAAAACAGTAGGTTACATCAGCAAAATGAAGCTTCAAACAATTTGATGAATCAAAGAAAGCAGAAGCTAGAGTTGATGGAGTTGTCACTTGGGAGGAACAACAAAAACAATGAAGCCAATTTCCATCATCAAGTAGTAGTAATTGGTGGTGGTTGTGGTAGTACTAATACTACACCTCATGATGCCACTTGTTCTTCATCAATATCTTCAACCAACAACAACAACAATGAGGGAAGTAGTAGCAATGTGGAAAAAGAACACATGTTTGAGAAAGTGGTAACACCAAGTGATGTAGGAAAATTGAACAGACTAGTGATACCAAAACAACATGCTGAGAAGTACTTCCCACTTGACTCCTCATCAAATGAAAAGGGTCTTCTCCTAAACTTTGAGGACAGAAATGGGAAGCTATGGAAGTTTAGGTACTCTTATTGGAATAGTAGTCAAAGCTATGTGATGACAAAAGGATGGAGCCGTTTTGTTAAGGACAAGAAGCTTGATTCTGGTGACATTGTTTCATTCAAACGTGGTGTTGGAGATTTGTATAGACATATTTTGTATATAGATTGGAGGAGAAGGCTTGATCATTCTCATAATCATAATCTTCTCCATCATGATCCTTCATCAACACCTTTGTTTCTTCCTAATCAATATTCCATTACTTGGGGTGGAAGGTTGTACTCTTTGCCTTCTCCAAATGCATCAACTTCTACTATGCTTCCTCCTCAACACAATCTCAATTATAATAGTCCTTTGTATAATACCTTTCATAATCAACAACTACAATATCATCAACAGCAATACTATATTGGTCACAGTGGAAGTGGACTAGGTTACCTGAGGTCAACACCATCAATGTCAACGCATCAAATTGGTGATCAAAACTTGCAAGAGAGAGGGAATAATATTGCCCCTATGATCATTGATTCGGTGCCGGTTACTCATCATCATCATCTACAAGATCCTCATCACCATGGTAGTATTGGTAGTACTACTAGTAATAATGCAGGAAAAATGTTAAGGCTATTTGGGGTGAACATGGAATGTGCTTCTTCACCAGATGAAGATTCAAAATGCTTGTCATCTTCAGCTTCAGCACCACTACATGTGATGACAATGGCTAATTCACTTTCCACTTCTTCTCTAAGGGTACCCTATGAAGATCACTCACTTTCACCATCTACAAGGGCAACTTCAGTGCTTTTTGATTTGGATCCTTCTTTGCAATACAGACAGTAG 1353 0.3806 MDLSKQVKGYSDSREEEELDEEASEATAEEIIRISREEENSRLHQQNEASNNLMNQRKQKLELMELSLGRNNKNNEANFHHQVVVIGGGCGSTNTTPHDATCSSSISSTNNNNNEGSSSNVEKEHMFEKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWKFRYSYWNSSQSYVMTKGWSRFVKDKKLDSGDIVSFKRGVGDLYRHILYIDWRRRLDHSHNHNLLHHDPSSTPLFLPNQYSITWGGRLYSLPSPNASTSTMLPPQHNLNYNSPLYNTFHNQQLQYHQQQYYIGHSGSGLGYLRSTPSMSTHQIGDQNLQERGNNIAPMIIDSVPVTHHHHLQDPHHHGSIGSTTSNNAGKMLRLFGVNMECASSPDEDSKCLSSSASAPLHVMTMANSLSTSSLRVPYEDHSLSPSTRATSVLFDLDPSLQYRQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1524 450 MobiDBLite consensus disorder prediction 101 120 - -
Lal3g1524 450 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 98 411 - -
Lal3g1524 450 MobiDBLite consensus disorder prediction 26 44 - -
Lal3g1524 450 SUPERFAMILY DNA-binding pseudobarrel domain 124 219 IPR015300 -
Lal3g1524 450 Coils Coil 36 56 - -
Lal3g1524 450 CDD B3_DNA 125 214 IPR003340 GO:0003677
Lal3g1524 450 Gene3D - 120 243 IPR015300 -
Lal3g1524 450 MobiDBLite consensus disorder prediction 101 121 - -
Lal3g1524 450 SMART B3_2 127 227 IPR003340 GO:0003677
Lal3g1524 450 ProSiteProfiles B3 DNA-binding domain profile. 127 227 IPR003340 GO:0003677
Lal3g1524 450 MobiDBLite consensus disorder prediction 1 54 - -
Lal3g1524 450 Pfam B3 DNA binding domain 127 230 IPR003340 GO:0003677
Lal3g1524 450 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 98 411 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1524 Lal-Chr3 20970791 20983305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1524 115 390 RAV Transcription Factor Family AT2G46870 50.352 1.14e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal3g1524 B3 2.2e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1524 - - lang:109329487 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1524 3 20970791 20983305 Lal3g1524 3 20970791 20983305 ECH