Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1518 ATGGATTCAACTGAGAAATTGAGTGAATCGCCAGCTATTGAGTTAACAGGAAAAATCATGATTGTGGCTATAATAATCTTATTCTTTGTTGTTGTATTTTGCTTTATGCTTCACCTATATGCCAAATTCAACTACCGCCGCCGCCGCCGCCGCTTTGTCTTTGCCACTGGTGAAGAACCACCTAGTCATGGTGCCCTTAGAAAGGGACTTGACCCTTTGATTCTAAGGTCACTGCCCATATTGGTGTTTCAATCTGAGGAATTTAAGGATGGTTTGGAATGTGCAGTTTGTTTATCTGATGTTGTTGAAGGAGAAAAAGTTAGGCTTTTACCCAAATGCAATCATGGGTTTCATGTGGATTGTATTGATATGTGGTTTCAATCACATTCTAATTGCCCTATTTGTAGGAACCCTCTTGGTTCTCAATCATGTACTTCAAATGATCGACAGAATGCCTCAGAGAATAGTGAACCATTAGAACCACAAAATTCTCCAAATTTTCCCACAAATGTGTTTATTTGGGGGAACCGGAGTCAAATTAGTTCTATTGGTGTTCTTTTGGAAGAGAGTAGTAGTAGTAGTAGTAGTAGTAGTTCTTCTACTACTACCACAGCTGCTACTACTACTTGCACTAGTGCTAGTTGTAGTAGTAACAGAAATCATGGAATGTTGGTGATTGATATACCAAGTGAGAGCACTTCATCTTCTATATCACCTTCTGCAAGTAGATTTGCTGAAGATGATTTGAAATCGCCAATGTCGGCTAGGTTGAGATCACTGAAGAGGCTTTTCAGCTGGGATAGAAGGTTAAATCCTTCTAGTCCTAGTCCTATAGACGTGGAACAAGGAGGGGAAGCACAACGTGCTCAGTGCCCATGA 879 0.405 MDSTEKLSESPAIELTGKIMIVAIIILFFVVVFCFMLHLYAKFNYRRRRRRFVFATGEEPPSHGALRKGLDPLILRSLPILVFQSEEFKDGLECAVCLSDVVEGEKVRLLPKCNHGFHVDCIDMWFQSHSNCPICRNPLGSQSCTSNDRQNASENSEPLEPQNSPNFPTNVFIWGNRSQISSIGVLLEESSSSSSSSSSSTTTTAATTTCTSASCSSNRNHGMLVIDIPSESTSSSISPSASRFAEDDLKSPMSARLRSLKRLFSWDRRLNPSSPSPIDVEQGGEAQRAQCP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1518 292 MobiDBLite consensus disorder prediction 268 292 - -
Lal3g1518 292 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Lal3g1518 292 MobiDBLite consensus disorder prediction 145 165 - -
Lal3g1518 292 Pfam Ring finger domain 93 136 IPR001841 -
Lal3g1518 292 CDD RING-H2_EL5_like 93 136 - -
Lal3g1518 292 SUPERFAMILY RING/U-box 74 142 - -
Lal3g1518 292 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 282 IPR044675 -
Lal3g1518 292 SMART ring_2 94 135 IPR001841 -
Lal3g1518 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 143 IPR013083 -
Lal3g1518 292 MobiDBLite consensus disorder prediction 229 252 - -
Lal3g1518 292 PANTHER RING-H2 FINGER PROTEIN ATL3 3 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1518 Lal-Chr3 20938066 20938944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1518 14 271 C3H Transcription Factor Family AT1G53820 37.417 5.79e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1518 - - lang:109329488 330.872