Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1512 ATGGCTGCAAATGAAGGAGGAAAGAAAGGTGGTAACTTTTACGAGGTTTTGGGATTGAAGAAGAATTGCACCCATTCTGAACTCAGAATTGCTTACAAAAAACTTGCACTTAAATGGCACCCAGATCGTTCTTCTTCTTCTTCTTCATCCAATGAAAACTCCATTGAAGAAGCTAAGAACAAATTCCAAGCAATTCAGCAAGCTTATTCTGTTTTATCTGACTCCAAGAAAAGAGCCTTGTATGATGTAGGAGTCTATGATAGCAATGATGATGATGATAAACTCGGTATGGGAGATTTCTTTACCCAATTGGCAACATTGATAAGACAAACAAAACCCTTTGAAAGTTGGAGGGAGATGCAAGAGGAATTGCAGCGAATAAAAGAAATGTGGCTAACCGATATTCTGCCACCGGAAAGCACCTCTCGTGCTTCTGCCGCTTCTTCTGCTTCAAATAAACGCAATTCCTCTGAGATGAATTCTGGGAAGGTGGATAGTACTTTTGGCTTTGATTCAGACTACCAGAACTTCGGTTCAGAGGCGGAGAGAAAGGGAGTAGAAGGAGGGATTCCAGAAGGAGATAGCAGTAGACGTAGGAGCGGTACTAAGCAAAAAACGTCATCCGGTCACGATGTTTCCAGTGATGACCATTCTGGAATTTCTGCAAAGTGA 672 0.4182 MAANEGGKKGGNFYEVLGLKKNCTHSELRIAYKKLALKWHPDRSSSSSSSNENSIEEAKNKFQAIQQAYSVLSDSKKRALYDVGVYDSNDDDDKLGMGDFFTQLATLIRQTKPFESWREMQEELQRIKEMWLTDILPPESTSRASAASSASNKRNSSEMNSGKVDSTFGFDSDYQNFGSEAERKGVEGGIPEGDSSRRRSGTKQKTSSGHDVSSDDHSGISAK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1512 223 ProSiteProfiles dnaJ domain profile. 12 85 IPR001623 -
Lal3g1512 223 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 217 - -
Lal3g1512 223 Gene3D DnaJ domain 2 99 IPR036869 -
Lal3g1512 223 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lal3g1512 223 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lal3g1512 223 PRINTS DnaJ domain signature 57 77 IPR001623 -
Lal3g1512 223 PRINTS DnaJ domain signature 170 189 IPR001623 -
Lal3g1512 223 PANTHER PUTATIVE, EXPRESSED-RELATED 8 217 - -
Lal3g1512 223 SUPERFAMILY Chaperone J-domain 12 104 IPR036869 -
Lal3g1512 223 SMART dnaj_3 11 77 IPR001623 -
Lal3g1512 223 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Lal3g1512 223 MobiDBLite consensus disorder prediction 177 212 - -
Lal3g1512 223 MobiDBLite consensus disorder prediction 138 223 - -
Lal3g1512 223 MobiDBLite consensus disorder prediction 138 174 - -
Lal3g1512 223 Pfam DnaJ domain 12 82 IPR001623 -
Lal3g1512 223 CDD DnaJ 12 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1512 Lal-Chr3 20883910 20887274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1512 14 82 C2H2 Transcription Factor Family AT1G74250 44.928 3.51e-11 60.5