Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1499 ATGGCATCATCTGAGCAACACCACGACACAGTTTTCGCCGAACAAGACATGGAAGAGGACGACGACGAATCTCACGACGACTTAATTGAAGAAGATGAAGATTATTTCGACGACGACGTTTTACCCGATCCCAACGATAATCAACCTTCCCCTTCCACCGCCCTTGCCGTCACCATCGCCGTCCCACCTCCCATCTCACCCGCCGCCACCACCACCACCGCCTCTGACTCAAAACGCTACCAAATCCAAGACAAAAAACCAATTGACGATTCTAGAAGACTCTTTCAGCGTCTTTGGACCGATGAAGACGAGATCGAATTGTTACAAGGTTTCCTTGATTACACGTCGCACCGTGGATCCTCTCATCACAACGATACCGCTTTGTTCTACGATCAGATCAAATCGAAGTTTCAGATTGATTTCAACAAAAACCAGCTTGTTGAGAAGATTCGAAGGTTGAAGAAGAAGTATCGTAACGTTCTCAACAAAATCAGTTCCGGTAAGGATTTTTCATTCAAAAGCGCTCACGATCAAGCCACGTTCGAAATCTCGCGCAAGATCTGGAGAAATATTGGTCAGGTCAGTGGTGGTGTCGTCGTTGATGATAATGCTTTGGATGAAGATGAAATCAATCTTAACCCGATTCAGAACCCTAATAACCATTACCCTAACCATAACCCTAACATTAATCTCAATTTAGTTCACTCGGTGGCGATACTCGGGAATTCAGGGGAGAAGAAGAGTACTCCATCAAGGAAGAGGTCACGGCCGCAATCAGCGATGATGAGGATCGATGAGAAACCACGTGAGCTGTTGAATGATGGATCAGGATTAGGATTAGGATCGGGATCGGGGTTGAATTTGAATTTGAACAAGGATCATAATTATATAAATAATTCAGCTGCTACTGCAACTGTTGCTGCTAATGTAAACAATAATAAGAATTATGAGAATAATTGTAACAGTGGGCAGCATCATAGTAGTAGTAGTAGTATACCTGGTTTGATTGAAGAGACGGTGAGGAGTTGTTTGTCGCCCGTGTTGAAGGAGTTGGTGAGTAGTAGTATCATGGGAGGAGGGGTGTTTGGAATTGGAGGATTCGGTTCCACGAATTCGATTCCGATGATGCCATTGAGTTATTTGGGATTGGGGAGTGGTGGAGATGCGGCGGATGAGAAGTGGAGGAAGCAACGGATCTTGGAGTTGGAAGTTTATGCGAAGCGGTTGGAGTTGGTGCAGGATCAGATCAAGGCTGCTCTGGATGAGTTGAGATCAGGTAGAGGAGGATGA 1290 0.4527 MASSEQHHDTVFAEQDMEEDDDESHDDLIEEDEDYFDDDVLPDPNDNQPSPSTALAVTIAVPPPISPAATTTTASDSKRYQIQDKKPIDDSRRLFQRLWTDEDEIELLQGFLDYTSHRGSSHHNDTALFYDQIKSKFQIDFNKNQLVEKIRRLKKKYRNVLNKISSGKDFSFKSAHDQATFEISRKIWRNIGQVSGGVVVDDNALDEDEINLNPIQNPNNHYPNHNPNINLNLVHSVAILGNSGEKKSTPSRKRSRPQSAMMRIDEKPRELLNDGSGLGLGSGSGLNLNLNKDHNYINNSAATATVAANVNNNKNYENNCNSGQHHSSSSSIPGLIEETVRSCLSPVLKELVSSSIMGGGVFGIGGFGSTNSIPMMPLSYLGLGSGGDAADEKWRKQRILELEVYAKRLELVQDQIKAALDELRSGRGG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1499 429 MobiDBLite consensus disorder prediction 242 276 - -
Lal3g1499 429 MobiDBLite consensus disorder prediction 1 53 - -
Lal3g1499 429 MobiDBLite consensus disorder prediction 15 41 - -
Lal3g1499 429 Pfam Protein of unknown function, DUF573 95 188 IPR007592 GO:0006355
Lal3g1499 429 Coils Coil 402 422 - -
Lal3g1499 429 Coils Coil 143 163 - -
Lal3g1499 429 MobiDBLite consensus disorder prediction 247 272 - -
Lal3g1499 429 PANTHER BNAANNG10740D PROTEIN-RELATED 1 426 IPR007592 GO:0006355
Lal3g1499 429 PANTHER BNAANNG10740D PROTEIN 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1499 Lal-Chr3 20785407 20786696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1499 1 425 GeBP Transcription Factor Family AT5G28040 41.350 7.56e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lal3g1499 DUF573 2.2e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1499 - - gmx:100779712 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0097 5 913069 914355 Lal3g1499 3 20785407 20786696 LSH
Lal3g1499 3 20785407 20786696 Lal18g0328 18 2767122 2768438 LSH