Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1492 ATGGGAGCACCAAAGAAAAGCGCGGTTAGGGTTTCAGAAGACACTGATGAATTGGTTCGTGTTCCGTTACAAGCTATTCTCTTAGCCGATAGTTTCACCACCAAGTTCAGACCTATCACTCTTCAACGCCCTAAGGTGTTGTTGCCATTGCTGAATGTTCCTATGATAAATTACACCTTGATGTGGCTCGAATCTGCTGGTGTAGAAGAGGTTTTTGTTTTCTGTTGTGCTCATTCCAAACAGGTTATTAGCTATTTGGAGAAATCTCAGTGGCTTTCTCAACCCAATTTTACTGTAACAACTATCGAGTCGCATAATTCTGTCAGCGCAGGAGATGCGCTTCGCCTAATATATGAGCGCAATGTGATACATGGAGACTTTGTCCTTATCAGTGGTGATACCATAAGCAACATGTCACTTACTGAGGCACTTAGAGAACATAAAGAACGGAAGAAGAAGGATAGTAATGCTGTGATGACCATGGTCATTAAACGGTCAAAACCTAATCCAGCAATCCGTCAGTCTCGACTTGGTACTGATGAAATTTTCATGGCCATCGATCCTGATACTAAGCAACTTTTGTATTATGAGGACAAGGCCGATCATTCAAAAGCCATTTTACATCTTGAGAAGTCATTGCTTGCTGATAACCCTTCCCTCTCTCTGCACCACGACAAGCAGGATTGTTTCATTGACATCTGCTCGCCAGAAGTCCTTAGTCTATTTACAGACAATTTTGACTACCAACATGTACGGCGTCATTTTGTCAAGGGGTTGCTCGTTGACGATTTAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCGGACTATGCTGCAAGGATTGATAATTTTCGAAGCTATGATACTGTCAGCAAGGATATAATTCATAGATGGACATATCCATTGGTGCCAGATGTTATGAATTTTGGCAATACAGCTACTAAACTTGAACGGCAAGGAATGTATCGTGCTTCAGAAATATCACAATCACAATCTGCTGTTATTGGCCCCTTCACTGCTATAGGATTTGGCACCAAAATTGGAAATAACACTAAAATTTCAAGTTCTGTTGTTGGAGAGGGATGTAAAATTGGGTCAAATGTTTACATAGAGGGATGCTATATATGGGACAATGTCATCATAGAAGATGGCTGCAAACTTAGGAATGCAGTTGTATGTGATGGGGTGACTATGAAATCAGGAGTTGTCCTGGAACCTGGTGTTATTTTGTCTTTCAAGGTTGTAGTTGGGCAGGGTTTTGTTGTTCCTTCTTATTCAAAAGTATCTCTGTTACAGCAGCCAGTTGAGGAAGATAGTGATGAGGAGCTTGAGTATGCTGACAGTACTAGTGCCATCACAAGCAAAGTGGATATGTCAGATGAAGAGGTTGCATCCCAAGTATTGGACACACATTTACATTCTGCATCAGAGCTAGGTGTGGGTGGGGTTGGTTATATTTGGTCCAAATGTGAAGGAGGCCATGAAGAAGAATGGAGGCACTCAGTAGCGCCTATTCCTGCAGATAAAATTTCTGAGGCAATGAAAATCATGGAAGATGAGTTGGAGTTAACTTATGATGGCAGTATTCTCCCAGCTTCTGGAGAGCTCAAACCTGATTGTAATGATTCAGAGGGTGATGATAATGAAGATTCTAGAGACGACTCTTATTTTGAGAAAGAGGTTGAAGCAACTTTTCTCAGGGCTGCACAAGAAAACATACAAGAAGCTCATTTGATCTTAGAAGTTAACTCCTTGAAGTTGTCATACAATAAGGTAGCTGCTGACTGTGCTGGAGCTGTATTTTATGCTCTGATGAAGTATGCTTTAGACACCGTCCATAGTTCAGCTGATAGCTTGGTGCAGAATGTTAAGGACATACTTAGAAAATGGAAAAATGTTCTTAGACCCTATCTGACTGACATAGATGACCAGATTGAAGTAATACTAAAATTTGAAGAAATGTGTTCAGAATCCGCAAAGGCGTTTGCTCCATTGTTCACAAGCATTTTGCACTTCATGTATGAAGAAGATATTGTAGAAGAAGATGCTATTTTAAATTGGGATGATGAGAAGAAAGATGCAGATGACTCAGATAAAGTGTTTGTTAAGCAGGCACAAGGATTGATTCAATGGCTAAGAGATGCATCTGAAGAAGATGACGACGAGGAAGAATAG 2178 0.4054 MGAPKKSAVRVSEDTDELVRVPLQAILLADSFTTKFRPITLQRPKVLLPLLNVPMINYTLMWLESAGVEEVFVFCCAHSKQVISYLEKSQWLSQPNFTVTTIESHNSVSAGDALRLIYERNVIHGDFVLISGDTISNMSLTEALREHKERKKKDSNAVMTMVIKRSKPNPAIRQSRLGTDEIFMAIDPDTKQLLYYEDKADHSKAILHLEKSLLADNPSLSLHHDKQDCFIDICSPEVLSLFTDNFDYQHVRRHFVKGLLVDDLMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGMYRASEISQSQSAVIGPFTAIGFGTKIGNNTKISSSVVGEGCKIGSNVYIEGCYIWDNVIIEDGCKLRNAVVCDGVTMKSGVVLEPGVILSFKVVVGQGFVVPSYSKVSLLQQPVEEDSDEELEYADSTSAITSKVDMSDEEVASQVLDTHLHSASELGVGGVGYIWSKCEGGHEEEWRHSVAPIPADKISEAMKIMEDELELTYDGSILPASGELKPDCNDSEGDDNEDSRDDSYFEKEVEATFLRAAQENIQEAHLILEVNSLKLSYNKVAADCAGAVFYALMKYALDTVHSSADSLVQNVKDILRKWKNVLRPYLTDIDDQIEVILKFEEMCSESAKAFAPLFTSILHFMYEEDIVEEDAILNWDDEKKDADDSDKVFVKQAQGLIQWLRDASEEDDDEEE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1492 725 CDD W2_eIF2B_epsilon 554 717 IPR044123 GO:0005085|GO:0031369
Lal3g1492 725 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Lal3g1492 725 SUPERFAMILY Trimeric LpxA-like enzymes 266 429 IPR011004 -
Lal3g1492 725 SUPERFAMILY ARM repeat 558 716 IPR016024 -
Lal3g1492 725 MobiDBLite consensus disorder prediction 531 555 - -
Lal3g1492 725 SMART 542_3 632 719 IPR003307 GO:0005515
Lal3g1492 725 Gene3D Hexapeptide repeat proteins 317 434 - -
Lal3g1492 725 Gene3D - 546 724 - -
Lal3g1492 725 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Lal3g1492 725 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 380 IPR029044 -
Lal3g1492 725 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 303 IPR029044 -
Lal3g1492 725 Pfam eIF4-gamma/eIF5/eIF2-epsilon 644 723 IPR003307 GO:0005515
Lal3g1492 725 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 724 - -
Lal3g1492 725 CDD LbH_eIF2B_epsilon 341 419 - -
Lal3g1492 725 ProSiteProfiles W2 domain profile. 552 723 IPR003307 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1492 1 717 Eukaryotic Initiation Factors Gene Family AT2G34970 61.878 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1492 K03240 - gmx:100784894 1204.12