Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1467 ATGATAGAATCATATAGAGGTTTTGTTGCAGAAACAGCTGGTGGATGCTTCAAACCTCATGTGGTGACTGTGAATGTTGGGGAGGATGTGAGAAGCAATGAAGTTGTTTGCATACTCTCTGCTACTGGTGCTGTATCAAGTGTCTCCATGCGCCATCAAAGTGATTCTAGTGAAGTTTTAAAATATGAGGGATGCTTTGAGATTGTATCTTTATGTGGGTCATGTACCTTTGCTAGTGGCACTGATGGTGCAAGACACAAAAATGGCATGTTGAGCATTATCCTGGGTAAAGGTGATGGAAGTGTTGTTGGAGGTTGCATTGAAAACTCAATGATAGCTGCTACCCCTATTCAATTAAAAGGGAGTTGCATTATTCATAAGGCTAAAACTATTGTCAAACTTACTGATTTTCATTTCATGCATCAGCTTTCTGTGGCCACTTTCAAGCAAAACATTATTAGTAAGAAAGTGAAGAGAAAGCTCTCAATTGAATCTCCTAATGTACCTGTTAATCAAGATTCATTAGAGGCTCAACAAAATGTTCCTAAGTTGATGGAAGGTGAACAAAGTCTAGTTTCACCAACATCAGGACCTATGCCAGCAACATCACCTAATGGAGCACCAGATAATGCCGTTCCTGCAACGACTAATGCAGAGACTAATACTTGTACCGATCATGAAAGTCTCGATATGAACTCGGTCTCTGATAATGGTGTTGGCCTTGAAAACCAGACAATGGATCCCATCACATTACAAAGCAAGGTTGAAGATGTTGATGTTAATGCTCCTCTCATATAA 798 0.3985 MIESYRGFVAETAGGCFKPHVVTVNVGEDVRSNEVVCILSATGAVSSVSMRHQSDSSEVLKYEGCFEIVSLCGSCTFASGTDGARHKNGMLSIILGKGDGSVVGGCIENSMIAATPIQLKGSCIIHKAKTIVKLTDFHFMHQLSVATFKQNIISKKVKRKLSIESPNVPVNQDSLEAQQNVPKLMEGEQSLVSPTSGPMPATSPNGAPDNAVPATTNAETNTCTDHESLDMNSVSDNGVGLENQTMDPITLQSKVEDVDVNAPLI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1467 265 PANTHER DUF296 DOMAIN PROTEIN 4 119 - -
Lal3g1467 265 PANTHER DUF296 DOMAIN PROTEIN 142 228 - -
Lal3g1467 265 MobiDBLite consensus disorder prediction 187 208 - -
Lal3g1467 265 ProSiteProfiles PPC domain profile profile. 1 151 IPR005175 -
Lal3g1467 265 SUPERFAMILY AF0104/ALDC/Ptd012-like 16 119 - -
Lal3g1467 265 Pfam Plants and Prokaryotes Conserved (PCC) domain 33 118 IPR005175 -
Lal3g1467 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 119 IPR039605 GO:0003680
Lal3g1467 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 142 228 IPR039605 GO:0003680
Lal3g1467 265 CDD DUF296 18 119 IPR005175 -
Lal3g1467 265 Gene3D - 18 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1467 Lal-Chr3 20574619 20576395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1467 2 119 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 38.583 2.50e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1467 - - lang:109345802 379.793