Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1465 ATGGATAAAGGATTTATGGCGCCAACAAGGAAACCCCGGACTATGAATAAGTGGCCTTCAAGTTTAAATGAGGTCTCTCCTGAGAAAGATGGAGTTAACTTGAACAAAAATAAGCAAAGGAAGAAAATTTTGTCTGATAAATTGGGACCTCAATGGAGCAAGGCAGAACTGGAGAGGTTTTATGAAGCATATAGGAAGTATGGGAAAGACTGGAAGAAGGTTGCTACAGTTGTGCGTAATAGATCTGTTGAAATGGTTGAGGCCCTTTACAATATGAACCGGGCGTACCTTTCTCTACCAGAGGGAACAGCTTCTGTTGTTGGCCTGATTGCAATGATGACAGATCACTATAATGTGCTGGAAGAGAGTGACAGTGAAAGGGACAGCAATGATGCACATGGATCTCGAAAACCTGTGAAACGAAAGCGTGGAAGATTTCAGCTTAGTATCTCAAAAGATTCTGTCCAGTCTCGGTCAATTACTTCTGACGATGGTTGCCTATCTCTATTGAAGAGAAGACACACTGACGGTAGCCAGCCTCGTGCAGTCGGGAAAAGGACACCTCGAATCCCAGTGTACTACTCCAATAAGATAGACAATGGGGAAAATTATATTTTGCCTAATAAAAGAAACCTGAAGTCAGCTTTTGATAATACTGATGATGAAGTTGCACATGTCGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGTGGCTCTCCCCAAATATCTCAAACACCATACACAAGATCACAGCAAAAGTCCTCTCCTGCTAAAAGCTGGGAAAAAATGTACCAACAGTCTAAGACAGTTCCTACCAAGTTTTATGATGCTTCTATGGATGAAGAGTTCTTAGAAGGTAGTATAGAAAGCAGGGGAGCCGAAAATGGAGAATGTTCTCGAGATACTAGTTCCTTGTTGGACCTGGGATCCATAGCCACTGTCGAAGTTCATCAGAAACGGGAAAATAATTACAGAAAGAAAGGAAGTGTGGAAAATGTTGGAAACCATTTTCTTGATAATGGTGGAGAAGCATGTAGTGGAACTGAAGGACTTAATTTAAGTTTGAAAGGAAAAGTTGATATTGAGGTTACTAATGCAAATCCTGAGAAATTGTCCCAAAAAGGCCAGAGGAAAAGAAGCAAGAAACTTTTGTTTGAAGATGAAGGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATCTTTCTCTAATGATACCACCTTCTACAATGGAATCTGACTCGCCTGTCCAGATGAAGGAAGATAGAATATATGCTGACAAAGATGAAAACTCTGTTTTACCTGAAGCAGCATCAACCAGCCAAAATAGAGACAGAATTACACTCCCAGGTCAAAAGGCTGTTTGTGCAGTCCCTGGAGTTGAGGTTTCAACCTCCAAAAAATCTAAACTTGGAAAGGAATCAGAAAATGATATGCAGCTTCCTTCTGCTGATAGGACATGCAAAAGAAAGGTCAAGTCTATGGTTTCGAAGGCTGGAGATGAAGAGAACAAACCCGTGATTAAAGGAAAACGCACTGATCAGACTTTCACTGTAGCAAAACAGTTAAAGTCAATCAGATCAACAGAAAGTCCTGTGTGTAGTGACCCAAAAGATTTAGCAGTATCAACTGCAGAAGTCCCAGTTGCAAGTGAAGTTATTTTATCAACTAAAAAGAAAAGTAGACGTAAGGCAAGTTTACCGAGAGCATTCATGACCAAAGAGAAGTGTTCTGAGAACATACTGACAAGCCAACCTAACAATTATTCAACTCCCATCCAGGATAAGGCATTATTTTTGAAGGAAAAGCTTTCTAGTTGTTTGTCATCGTATATGTTTCGCAGATGGTGTACGTTTGAATGGTTCTATAGTGCAATTGATTATCCATGGTTTTCCAAACAGGAGTTCATGGAATACTTAAATCATGTTGGTCTAGGGAATATCCCAAGGCTAACTCGTCTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTTCGTGAAGAAAGACAAAAACTAGAACAATATAGGGAATCTGTTAGGAAGCATTACACTGAATTACGGACTGGTATCAGGGATGGACTTCCAACTGATTTAGCTAAACCTTTATATGTTGGACAACTAGTAATTGCTCTTCACCCAAAGACAAGAGAGATCCATGATGGAAGTGTGCTTACAGTTGACCATGACAAGTGCAGGGTTCAGTTTGACCGCCCTGAATTGGGTGTTGAATTTGTCAGGGACATTGATTGCATGCCTTTGAATCCATTGGAAAATATGCCAGAAGCTCTGAGGTGGCAGATTGGTGCTGGCAATATCCCTTTTATGAGTAAAGAACCACAAATGAAGGGAAATTCCAGATTTGGTGGGTGTCTGCCGCATGATTCAAGTGGACCTGTGGAGAAGCCATCAGCGTCTTCAATCTCTCTCACTAAGCAGGGAGTGGGGAGTGCTAACCATTCTGTTTCCCAAACAAATGCTGCTATTACTAATTACCTGTGTACACAACCAGCAGTGTGTGCCCAACCATGTACAGTGACCGATCGTCAAACTAAGGAAGCTGATATACATGCCTTGTCTGAGTTTACACGTGCTCTAGATAAAAAGGAGAAATTAGTAATGGAACTAAAAACCGCCAATGATGACATATTGGAAAACAAAAATGGGGTAGAGTGCTTCAGGGATTCAGAGGCTTTCAAGAAGCATTATGACATGGTTTCTAATGCATTGCTTCAGTTGAGGCAACACAATTCTTACATAGGAAACTATTTGCCACCATGGATGAAGCCCCCAGTAAGTTTCAATGTTCTGGATGGTCTTCCTAGTACTAGTGCTTTGGATAGTTCTCTAGCCCAAGAGTTAGGGTCAACTGGCATTGATATTATTAAAGGATCCAGGCTTAAAGCACGTGCCATGGTGGATGCTGCATTTCAGGGATTGTCTTGGATGAAGGAAGGTGAAGATGGTTTCATGAAGATTGGGAAGACGTTGGATTCTATCAACCATGAGCCTTTGGCCACCAACTCTAGGTTACCTGTGATCAGGTCCCAAGATCAAGTAAATGGCAGTTTTGATTACCATAATCGGTCAATTTTCTGTTCAGCTGAGCCCTTACCCAATGATGATGTACCTGGTCCAAAATTGCATCATGATTCTGTCAAAGTTGATACTCAAATTCCTTCAGAGCTCATAACTTCTTGTGTTGCTACATTGATCATGATACAGAATTGTACTGAACGTCAATATCCTCCAGCTGATGTGGCTCAGATTATAGATTCTGCTGTTACCAGTTTGCATCCATGCTGTCCACAAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATTCCTACTTGA 3414 0.4124 MDKGFMAPTRKPRTMNKWPSSLNEVSPEKDGVNLNKNKQRKKILSDKLGPQWSKAELERFYEAYRKYGKDWKKVATVVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERDSNDAHGSRKPVKRKRGRFQLSISKDSVQSRSITSDDGCLSLLKRRHTDGSQPRAVGKRTPRIPVYYSNKIDNGENYILPNKRNLKSAFDNTDDEVAHVAALALTEAAQRGGSPQISQTPYTRSQQKSSPAKSWEKMYQQSKTVPTKFYDASMDEEFLEGSIESRGAENGECSRDTSSLLDLGSIATVEVHQKRENNYRKKGSVENVGNHFLDNGGEACSGTEGLNLSLKGKVDIEVTNANPEKLSQKGQRKRSKKLLFEDEGSALDALQTLADLSLMIPPSTMESDSPVQMKEDRIYADKDENSVLPEAASTSQNRDRITLPGQKAVCAVPGVEVSTSKKSKLGKESENDMQLPSADRTCKRKVKSMVSKAGDEENKPVIKGKRTDQTFTVAKQLKSIRSTESPVCSDPKDLAVSTAEVPVASEVILSTKKKSRRKASLPRAFMTKEKCSENILTSQPNNYSTPIQDKALFLKEKLSSCLSSYMFRRWCTFEWFYSAIDYPWFSKQEFMEYLNHVGLGNIPRLTRLEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQLVIALHPKTREIHDGSVLTVDHDKCRVQFDRPELGVEFVRDIDCMPLNPLENMPEALRWQIGAGNIPFMSKEPQMKGNSRFGGCLPHDSSGPVEKPSASSISLTKQGVGSANHSVSQTNAAITNYLCTQPAVCAQPCTVTDRQTKEADIHALSEFTRALDKKEKLVMELKTANDDILENKNGVECFRDSEAFKKHYDMVSNALLQLRQHNSYIGNYLPPWMKPPVSFNVLDGLPSTSALDSSLAQELGSTGIDIIKGSRLKARAMVDAAFQGLSWMKEGEDGFMKIGKTLDSINHEPLATNSRLPVIRSQDQVNGSFDYHNRSIFCSAEPLPNDDVPGPKLHHDSVKVDTQIPSELITSCVATLIMIQNCTERQYPPADVAQIIDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1465 1137 MobiDBLite consensus disorder prediction 121 135 - -
Lal3g1465 1137 Gene3D - 1 104 - -
Lal3g1465 1137 Pfam DIRP 621 722 IPR033471 -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 121 145 - -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 466 485 - -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 235 264 - -
Lal3g1465 1137 CDD SANT 52 93 IPR001005 -
Lal3g1465 1137 Coils Coil 867 894 - -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 14 30 - -
Lal3g1465 1137 SUPERFAMILY Homeodomain-like 47 95 IPR009057 -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 467 485 - -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 237 264 - -
Lal3g1465 1137 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 6 1137 IPR028306 -
Lal3g1465 1137 MobiDBLite consensus disorder prediction 1 32 - -
Lal3g1465 1137 SMART DIRP_2 622 723 IPR033471 -
Lal3g1465 1137 PANTHER LIN-9 6 1137 IPR010561 GO:0006351|GO:0017053
Lal3g1465 1137 Pfam Myb-like DNA-binding domain 51 87 IPR001005 -
Lal3g1465 1137 ProSiteProfiles SANT domain profile. 47 84 IPR017884 -
Lal3g1465 1137 SMART sant 48 96 IPR001005 -
Lal3g1465 1137 Coils Coil 674 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1465 Lal-Chr3 20555295 20565744 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal3g1465 DIRP 5.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1465 - - gmx:100816217 1421.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1465 3 20555295 20565744 Lal3g1465 3 20555295 20565744 ECH