Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1441 ATGGAGCATTTCTCCTCTATGTTCAATGGTTTGGCGAGTTTGTTTTCGATGAAAAAGGGAAGAAGGTCTAGTAAGCATGATAGGAGAGAAGCTTCTGAAGCAATGGTAATAGATGCTAAGAAAAATGAGTTGATATTGTGTAGTTCAGGGACTGTTAATGTAGATGGTTCAAACAACTTTGTCTCAGTTTTCTCAAAGAGAGGCAAAAAAGGAGTGAACCAAGATTGCAGCATAGTATGGGAGGAATTTGGATGCCAAAAAGACATGATTTTTTGTGGAATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCTAAAAGAGTAAGAGAGTCAATGCCATCATCTTTGCTATGTAACTGGCAAGAAACAATTGCTCAAACTTCACTTGATCCAGATTCTGATATATATGATGAGAAAAAGCAACACAGATTTAATATATGGAAGCATTCTTACTTGAAAACTTGTGCTGCAATCGATCAAGAACTCGAGCGTTATCGCAAAATCAACTCCTTTTACAGTGGAACTACTGCCCTCTCAATTGTTAGACAGGGTGAACTCATTGTGATAGCAAATGTTGGTGACTCACGTGCTGTGTTAGCTACAATATCAGATGATGGAAATGTTGCACCAATTCAGCTAACACTTGATTTCAAGCCCAATTTACCTCAAGAGGAAGAGAGAATCATTCAGTGTGAAGGGAGAGTTTTCTGCTTAGAGGATGAGCCAGGAGTGCATAGGGTATGGTTGCCAGATGAAGAAACTCCAGGACTAGCCATGTCTAGAGCTTTTGGAGATTACTGCATCAAAGAGTATGGTCTTATTTCTGTGCCTGAGGTAACACACAGAAATATAAGCACCAGAGACCAATTTGTTGTGCTTGCTACTGATGGGGTTTGGGATGTAATCTCAAATCAAGAAGCAATAGATATTGTATATTCAACACAAGACAAAGCAAAGTCAGCAAAAAATCTAGTGGAGTGTGCACTGCATGCTTGGAAAAGAAAAAGGAGTGGCATTGCCATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTAG 1065 0.3953 MEHFSSMFNGLASLFSMKKGRRSSKHDRREASEAMVIDAKKNELILCSSGTVNVDGSNNFVSVFSKRGKKGVNQDCSIVWEEFGCQKDMIFCGIFDGHGPWGHFVAKRVRESMPSSLLCNWQETIAQTSLDPDSDIYDEKKQHRFNIWKHSYLKTCAAIDQELERYRKINSFYSGTTALSIVRQGELIVIANVGDSRAVLATISDDGNVAPIQLTLDFKPNLPQEEERIIQCEGRVFCLEDEPGVHRVWLPDEETPGLAMSRAFGDYCIKEYGLISVPEVTHRNISTRDQFVVLATDGVWDVISNQEAIDIVYSTQDKAKSAKNLVECALHAWKRKRSGIAMDDISAICLFFHS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1441 354 CDD PP2Cc 59 352 IPR001932 -
Lal3g1441 354 Gene3D - 44 353 IPR036457 -
Lal3g1441 354 SUPERFAMILY PP2C-like 54 353 IPR036457 -
Lal3g1441 354 SMART PP2C_4 52 350 IPR001932 -
Lal3g1441 354 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Lal3g1441 354 Pfam Protein phosphatase 2C 84 327 IPR001932 -
Lal3g1441 354 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 354 - -
Lal3g1441 354 PANTHER ALPHABET, ISOFORM E-RELATED 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1441 Lal-Chr3 20341934 20346405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1441 1 353 PP2C-type Phosphatase Gene Family AT3G05640 71.348 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1441 - - gmx:100808955 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1441 3 20341934 20346405 Lal18g0368 18 3135445 3139477 LSH
Lal3g1441 3 20341934 20346405 Lal12g0585 12 4190478 4194050 PCT
Lal12g0585 12 4190478 4194050 Lal3g1441 3 20341934 20346405 PCT