Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1439 ATGGCAACAGAGCAAATTTTGCCATTCTCTGTTGTATCTGTGGTTGAAGATGTTCTTCAAAATCATGGTGGAAGATTGAGTGATGTCAATTTGGCTTCAAGAAAAGCTGAAGAAGCTTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTAAGAAAAACAGTTGGAGTTGTTGGAGGGAAAGACTTGCCTGCTGAACCTTCCGAAGAAGCTTTCAGGCTCGGATTGCGCAGCGGGATCATCCTCTGCAATGTTCTTAATAGAGTTCAACCAGGGGCAGTGTCAAAGGTAGTTGAAGCTCCCAATGATTCTGTTCTTATTCCTGATGGGGCAGCATTGTCTGCATTTCAATACTTTGAAAATGTAAGGAATTTTCTTGTAGCTTTGGAGGAACTAGGGCTTCCTACTTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGGTAGTGAATTGTGTACTAGCACTTAAGTCCTATGCTGAATGGAAACAAGGAGGGAAATTTGGAACATGGAAATATGGTGGCATTGGGAATTCAAAGCCACCTACCTCTGGGAAGCAACTTATGAGAAAAAACTCAGAACCATTCATGAAGTCTTCATGGAATACGCCATCGGTAGATAGAGATGCTATGAGTGATTACTCTTCATACAGTGATTCCGGGCTTGAGCACAATGAAGGGGGTTCCTTTCCTTTCTTACATTCATTAGTTCGCGAATATTTGTGTGACAAGAGGCCAGAAGAAATTCCCACTGTTGTGGAGTCCCTGCTTAGCAAAGTCGTGGAGGAGTTTGAGCGTCGCATGCATATCCAACATGAAACACTTAAAATAACTCAAGATGAAAAGCCACCTTCTGAACTAGAATGTTCAATTTCAAAAGCTACTTCTGTTGATGAAGAGATGGAAGAAAAGGAAGATTCAGAGGATCTACATGTTAAAGAGGAGTTAGAAGAGGAATCTTATGATAAGTACAATAGTCATGATGAATCAATTAGCCAGAATTTGAAGAAGCAAGAATTAGTCCAACAACAAAATAGAAGCATTCAGGAATTGAAAACTATAGTCTATCAAACAAAATCAGGAATGCAATTTCTGCAAAAGAAATACCAAGAGGAGATCATCAATCTAAGTAAGCACTTGCATAGCCTAGCTTCTGCTGCATCAGGATATCATAAAGTTCTCGAAGAAAACCGTAAGTTATACAATCAAGTGCAGGACCTAAAAGGAAATATTCGGGTGTATTGTCGAGTTCGACCCTTCTTAGGTGGCCAACCAAGCCATTATAGCTCGGTCAGTAATGTGGAGGAGGGAAATATCTCAATCTTAACACCTTCCAAATATGGCAAAGAAGGGAAGAAGATATTTAATTTCAACAGAGCATTTGGTCCTTCTGCAACCCAAGCGGAAGTTTTCTCAGATATGCAGCCTCTGATTCGTTCTGTTCTAGACGGGTACAATGTTTGTATATTTGCCTATGGTCAAACAGGATCAGGAAAAACACACACTATGTCTGGACCAAACGAACTTACCGATGAAACAATAGGTGTTAACTACCGTGCATTGGGAGATCTTTTCCTTCTATCAGAACAAAGGAAAGACACCATTTGCTATGATATCAATGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGATCTATTAACTACAGATGAAATTCGCAACAGTTCCCACAATGGCATTAACGTTCCGGACGCAAACCTTGTTCCTGTTTCATCAACTTTGGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGGGCTGTTGGTTCTACTGCCATGAATGATCGCAGTAGTCGTTCTCACAGCTGCCTGACAGTTCATGTTCAAGGAAGGTACCTAACATCGGGAAATACAATTCGCGGTAGTATGCATCTCGTGGACCTTGCAGGAAGTGAAAGGGCTGATAAATCCGAGGCCACAGGGGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGAGATGTAATTGCTTCCCTTGCCTCAAAGAATGCACATGTTCCTTACAGAAACAGTAAACTTACTCAGCTTCTTCAAGATTCTCTTGGAGGGCAAGCTAAGACACTCATGTTTGTTCATATTAGTCCTGAGCCTGAAGCTATTGGAGAAACACTTAGTACACTGAAGTTTGCCGAACGGGTTTCGACTATTGAACTTGGTGCTGCTAGAGTTAATAAAGATACTACTAATAACAATAATAGTAATTCAGATGTGAAAGAGCATAAAGAACAGATTTCTAGTCTAAAGGGAGCATTGGCTAGAAAGGAGGGAGAACAAGTACGTGAAAATAGTAGCAACCATGAAGCACCAAAGTTGAAATCTTATGGTTCTTCTCCTATAAGATTTGGAAGCCAAAAGCCAAGAGATGATTCAAGTAGCCTAGAGGGACAGAAAAAGGCAGCAACAAAGCTGAAAAGAAGAAGCCTAGATATACATGACATGTATAGAAATTCACCTCAATGGCCACATGGTGTAAATTATGGTACAAATGTAAAAGATGATGATAAAGAATCATCAACTTCTAGTGATTGGAATGATAAGATTATGATGAAAAGGAATGATAGTTTAACAAGTGATGATAGCTTAGTTGGACAATGGGAATCAGAAACTAAACAATACTCTCCATTGTTGAGTCCTACTTCTCTTTCAGAGACTTCAAAAATGTGCCTTGAAACTTCTTCATTGCATGGTTATGATATGAATATGAATATCAATGATGATTGTGATGAACTTGACATTGCAACTAGTGAATCTTCAGAATCTGAGTTGAATTGGTTATCACCACAAATACCTAAACCAACCAACATTTCAAATGGATTACCCTCTAAATCAAAGAAATCATCAACTCAACCAAAACCATCAAGGATACCAGAACCAAGGAGTATGATCCCATCATTAATTCCTACACCAGCAAGGAAATATTCCACAGTAGTTAGTCAACCCAGAAAGCTTCCAGGGCCTATTGATGTTAAGAGAAAAAGTGGTAATGCCAAGTGA 3039 0.3962 MATEQILPFSVVSVVEDVLQNHGGRLSDVNLASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEAFRLGLRSGIILCNVLNRVQPGAVSKVVEAPNDSVLIPDGAALSAFQYFENVRNFLVALEELGLPTFEASDLEQGGKSSRVVNCVLALKSYAEWKQGGKFGTWKYGGIGNSKPPTSGKQLMRKNSEPFMKSSWNTPSVDRDAMSDYSSYSDSGLEHNEGGSFPFLHSLVREYLCDKRPEEIPTVVESLLSKVVEEFERRMHIQHETLKITQDEKPPSELECSISKATSVDEEMEEKEDSEDLHVKEELEEESYDKYNSHDESISQNLKKQELVQQQNRSIQELKTIVYQTKSGMQFLQKKYQEEIINLSKHLHSLASAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGQPSHYSSVSNVEEGNISILTPSKYGKEGKKIFNFNRAFGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNELTDETIGVNYRALGDLFLLSEQRKDTICYDINVQMLEIYNEQVRDLLTTDEIRNSSHNGINVPDANLVPVSSTLDVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGRYLTSGNTIRGSMHLVDLAGSERADKSEATGDRLKEAQHINKSLSALGDVIASLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEAIGETLSTLKFAERVSTIELGAARVNKDTTNNNNSNSDVKEHKEQISSLKGALARKEGEQVRENSSNHEAPKLKSYGSSPIRFGSQKPRDDSSSLEGQKKAATKLKRRSLDIHDMYRNSPQWPHGVNYGTNVKDDDKESSTSSDWNDKIMMKRNDSLTSDDSLVGQWESETKQYSPLLSPTSLSETSKMCLETSSLHGYDMNMNINDDCDELDIATSESSESELNWLSPQIPKPTNISNGLPSKSKKSSTQPKPSRIPEPRSMIPSLIPTPARKYSTVVSQPRKLPGPIDVKRKSGNAK 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1439 1012 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lal3g1439 1012 Pfam Calponin homology (CH) domain 43 162 IPR001715 GO:0005515
Lal3g1439 1012 Coils Coil 391 411 - -
Lal3g1439 1012 SUPERFAMILY Calponin-homology domain, CH-domain 43 173 IPR036872 -
Lal3g1439 1012 MobiDBLite consensus disorder prediction 750 782 - -
Lal3g1439 1012 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 993 - -
Lal3g1439 1012 MobiDBLite consensus disorder prediction 843 861 - -
Lal3g1439 1012 Gene3D - 27 177 IPR036872 -
Lal3g1439 1012 MobiDBLite consensus disorder prediction 739 861 - -
Lal3g1439 1012 Coils Coil 752 772 - -
Lal3g1439 1012 Pfam Kinesin motor domain 417 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1439 1012 ProSiteProfiles Kinesin motor domain profile. 411 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1439 1012 MobiDBLite consensus disorder prediction 805 827 - -
Lal3g1439 1012 CDD KISc_C_terminal 409 733 - -
Lal3g1439 1012 Coils Coil 1004 1012 - -
Lal3g1439 1012 MobiDBLite consensus disorder prediction 931 969 - -
Lal3g1439 1012 SMART kinesin_4 409 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1439 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 731 IPR027417 -
Lal3g1439 1012 SMART ch_5 42 160 IPR001715 GO:0005515
Lal3g1439 1012 ProSitePatterns Kinesin motor domain signature. 631 642 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal3g1439 1012 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 993 - -
Lal3g1439 1012 MobiDBLite consensus disorder prediction 929 1012 - -
Lal3g1439 1012 Gene3D Kinesin motor domain 353 733 IPR036961 -
Lal3g1439 1012 PRINTS Kinesin heavy chain signature 485 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1439 1012 PRINTS Kinesin heavy chain signature 601 618 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1439 1012 PRINTS Kinesin heavy chain signature 632 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1439 1012 PRINTS Kinesin heavy chain signature 681 702 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1439 Lal-Chr3 20313700 20322431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1439 399 731 Calmodulin-binding Proteins AT5G65930 41.813 6.25e-72 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0497 24 3497174 3503774 Lal3g1439 3 20313700 20322431 ECH
Lal3g1439 3 20313700 20322431 Lal3g1439 3 20313700 20322431 ECH
Lal3g1439 3 20313700 20322431 Lal5g0164 5 1430280 1437359 LSH
Lal3g1439 3 20313700 20322431 Lal18g0371 18 3166959 3175543 LSH