Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1436 ATGGAAGGTATCTCTTCCTTAACACAAAACATGGCTCCCCAAACTCAATCTCTAGTGTTTAAAGTGAGGAGAAACCCACAGGAGCTAGTAACACCAGCAAAGCCAACACCCAAAGAATTTAAGCTTCTTTCTGACATAGATGATCAAACTAGTTTGCGTTCCCTCACCCCTTTAGTAACAATATATCGCAATAACCCATCAATGGAAGGAAAAGACCCAGTTGAAATCATTAGAGAAGCACTTTCTAAGACACTTGTGTTTTACTATCCATTTGCTGGAAGACTTAGAAATGGTCCTAATGGAAAATTAATGGTTGATTGTACTGGTGAAGGAGTCATTTTCATTGAAGCTGATGCAGATGTCACACTGGATCAGTTTGGTATTGATCTTCATCCTCCATTCCCTTGCTTTGATCAGCTCCTTTATGATGTTCCTGGTTCAGATGGAATTCTTGATTCTCCACTCCTTCTTATACAGGTAACACGCCTCAAATGTGGTGGATTTATCTTTGCTGTGCGTTTAAACCATGCTATGTGTGATGCAATTGGAATGTCTCAGTTCATGAAGGGTTTAGCAGAAATAGCTCGTGGTGAACCAAAACCTTTCATTCTTCCTGTGTGGCATAGAGAACTTTTATGTGCAAGAAACCCACCAAAAGTTACATTCATCCATAATGAATACCAAAAACCACCACATGATAACAACAATAACAACTTCATACTCCAACATAGTTCCTTTTTCTTTGGCCCTAATGAGTTAGATGCTATTCGTCGTCTTCTTCCATATCACCACTCAAAATCTACTACAAGTGACATCCTCACAGCATTCCTATGGCGTTGTAGAACACTTGCATTACAACCAGAAAACCCTAATCACGAGTTTCGCCTATTGTACATTCTCAATGCACGTTATGGACGTTGCAGCTTCAACCCTCCACTCCCTGAAGGTTTTTATGGCAATGCTTTTGTTTCACCAGCAGCAATTAGCACTGGAGAAAAACTTTGCAATAACCCTCTTGAGTATGCTTTAGAGTTAATGAAGGAAGCGAAAAGTAAAGGAACTGAGGAATATGTGCATTCTGTGGCAGATCTTATGGTGATCAAAGGAAGACCCTCATACTTCTACAATGATGTAGGGTATTTAGAGGTATCAGATCTTACAAAGGCAAGGTTTAGGGATGTAGATTTTGGGTGGGGTAAGGCTGTGTATGGTGGAGCAACTCAAGGTTATTTTAGTAGCATTCTCTATGTTTCTTATACCAACTCCAAAGGAGTTGAAGGTATAATGGCACTAACTAGCCTTCCAACAAAAGCCATGGAGAGGTTTGAGAAAGAGTTGGATGATTTATTCAAGACAAAGGATAAGTCTCAAATATTAAGGTCACACATTTGA 1392 0.3966 MEGISSLTQNMAPQTQSLVFKVRRNPQELVTPAKPTPKEFKLLSDIDDQTSLRSLTPLVTIYRNNPSMEGKDPVEIIREALSKTLVFYYPFAGRLRNGPNGKLMVDCTGEGVIFIEADADVTLDQFGIDLHPPFPCFDQLLYDVPGSDGILDSPLLLIQVTRLKCGGFIFAVRLNHAMCDAIGMSQFMKGLAEIARGEPKPFILPVWHRELLCARNPPKVTFIHNEYQKPPHDNNNNNFILQHSSFFFGPNELDAIRRLLPYHHSKSTTSDILTAFLWRCRTLALQPENPNHEFRLLYILNARYGRCSFNPPLPEGFYGNAFVSPAAISTGEKLCNNPLEYALELMKEAKSKGTEEYVHSVADLMVIKGRPSYFYNDVGYLEVSDLTKARFRDVDFGWGKAVYGGATQGYFSSILYVSYTNSKGVEGIMALTSLPTKAMERFEKELDDLFKTKDKSQILRSHI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1436 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 452 - -
Lal3g1436 463 Pfam Transferase family 21 447 - -
Lal3g1436 463 PANTHER ALCOHOL ACYLTRANSFERASE 20 452 - -
Lal3g1436 463 Gene3D - 17 224 IPR023213 -
Lal3g1436 463 Gene3D - 225 446 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1436 Lal-Chr3 20291263 20295713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1436 21 446 Monolignol Biosynthesis Gene Families AT5G48930 29.530 2.15e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1436 K19861 K13610 ag:BAD89275 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1436 3 20291263 20295713 Lal3g1436 3 20291263 20295713 ECH