LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal3g1435	ATGGCATCAAAAAGGGGATCTATCGAGGAGGCTAATGATGACATGGATCGTCAAGTTCCTAGTAAAAGGAGACACGGTCATTTGGAACAAGAAGAAACTAGCAGTAATGCCATTGAAGAACAATGGATGAATGTCATTGCATCCTTATTTCGAAATGTGATGAGAGAGGAGATTCCACGTATACTCCAACAACACCTATCCCCAAGTTATGGATTAAGCCTTAATCAGAAGAATGATACATCTAGAGGAAGAGCTTATCAATTGTGCTTCATAAATCAACTACCTAAGAAAATTTTCACTTTCTCAAAGATCATAGCTGAGGATGGTGCTCCACTTAAAATTGAGCTGCATGATACAACATATCACAACCACATAGTCAATGAAGAAGGTTCATTATTGAAGATCCAAGTATGTGTCCTAAATGGTGATTTTGGATCCAATAATGGAAATGAGAAAATGACCAAAGAGGAATTTAATGCCAAAACTTTACGTCCAAGAGAGGGGAAAGGACCATTACTAAATGGTGATGATACTTTTGTAACATTGAAAAATGGAGTTGGTTACATAACTAAGAAGATTGTGTTTAGTGATAATTCGAGTTGGACAAGAAGTGGCATGTTTCGGTTAGGAGTTAAAGTAGTGCAATCAACTTTCATTGGTGTTGACATTAGGGAAGGCACAAGTGAACCTTTTAAGGTCAAGGATAACCGAGGAGAGGTGTACAAGAAACATGATTGTCCTTCATTGAATGATGAAGTATGGCGTCTAAAAAGGATAGCAAAAGATAGTAAAATCCACAAGAACTTGTCATCTAATAATATAAACAATGTCAAGGATCTATTACGTTTATACATAACCAACCAAGCTTCATTAAAAGAGATTATTGGCAACATTCCAAGGAAGTCATGGGATACGATTATTGAACATGCTAAAGCTTGTAACATTGATGATGATGATAAGCTCTATGTCTATCACTGGTTTTCAGCACAAAAATCAGTATCCATTGTCTTCAATTGCATCTATAAGGTTGTGGAAGTGTCCTTTAATTGGCCAAATTTTCGTTCTATTGAAACTCTGACTTTGGACGAAAAGCTTTTGGTGGAAAGAGTGAAGCAGCAAGCTTACACAAATGTTAAGGATAATATGATGCTACTTGAGACAACACCACATAGCTTGGTGAAAACATTGAGTGGTGTACAACCTATGCAACATAGTACTATGGGTCAAGCTTTGCAACAGTTTGATATCTCAATTGCTCAGCAAGAAAGGTGTTCAAATTTGTGTGAACCATCAACCTCAATATCACATATCGATGAAGCCACACACAGTGACCAGCTAGGTTCTAATCAACACCAAGAGTCAGGAGAAATGCCACTAAGGTGGTTAGCACAAGGAAATTTCAGTACTGGAACATATAATGATGAAAATGAATGGCTAGTTGCTAAATCACAATCACATATTGATCAATTTCCAATTTGTTTTTCACCATGGGAACAACAAGTAAATTTTTTATACCCTACATTAGGTGATGGAGCAGAATCTAGCAACCATTATTGCTCTATCCCTAATACTAGTGTGTATATTTCAAGCAAAGGGAAAGGCAAGACAATTTGGCATAAGATTCGAAGTGCTCTCAAATGGGTTATATTGCATCTATCTATAAAAAGGAAGGCAAAGCTTTTTCACCCTTAG	1692	0.3676	MASKRGSIEEANDDMDRQVPSKRRHGHLEQEETSSNAIEEQWMNVIASLFRNVMREEIPRILQQHLSPSYGLSLNQKNDTSRGRAYQLCFINQLPKKIFTFSKIIAEDGAPLKIELHDTTYHNHIVNEEGSLLKIQVCVLNGDFGSNNGNEKMTKEEFNAKTLRPREGKGPLLNGDDTFVTLKNGVGYITKKIVFSDNSSWTRSGMFRLGVKVVQSTFIGVDIREGTSEPFKVKDNRGEVYKKHDCPSLNDEVWRLKRIAKDSKIHKNLSSNNINNVKDLLRLYITNQASLKEIIGNIPRKSWDTIIEHAKACNIDDDDKLYVYHWFSAQKSVSIVFNCIYKVVEVSFNWPNFRSIETLTLDEKLLVERVKQQAYTNVKDNMMLLETTPHSLVKTLSGVQPMQHSTMGQALQQFDISIAQQERCSNLCEPSTSISHIDEATHSDQLGSNQHQESGEMPLRWLAQGNFSTGTYNDENEWLVAKSQSHIDQFPICFSPWEQQVNFLYPTLGDGAESSNHYCSIPNTSVYISSKGKGKTIWHKIRSALKWVILHLSIKRKAKLFHP	563

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal3g1435	563	MobiDBLite	consensus disorder prediction	1	35	-	-
	Lal3g1435	563	Pfam	Calmodulin binding protein C-terminal domain	320	379	IPR046829	-
	Lal3g1435	563	Pfam	Calmodulin binding protein central domain	248	313	IPR046830	-
	Lal3g1435	563	PANTHER	OS02G0177800 PROTEIN	4	557	IPR012416	GO:0005516
	Lal3g1435	563	PANTHER	CALMODULIN-BINDING PROTEIN	4	557	-	-
	Lal3g1435	563	MobiDBLite	consensus disorder prediction	1	34	-	-
	Lal3g1435	563	Pfam	Calmodulin binding protein-like N-terminal domain	86	236	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal3g1435	Lal-Chr3	20280003	20286221	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal3g1435	41	378	Calmodulin-binding Proteins	AT5G26920	42.647	1.46e-72	236

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal3g1435	-		-	lja:Lj1g3v4083120.1	466.077

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal3g1435	3	20280003	20286221	Lal3g1435	3	20280003	20286221	ECH