Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1433 ATGGAGATGCAGAAAGAATGTTCCAAAGGAAGCTTTTTCAGCTTGTTTGATTGGAATTCCAAATCTAGAAAGAAGCTGCTTTGGAATAATCCTAATTTACCTGAGGGTTCAAAGCATGGAAAGGAAAATGTGGAGAACATGCCAATGGTGACCAATAGGATAAAAGTAGATAAAAATGGAGCCAGCCCGAGTAACATTGTAAGTTCTGATTTTAGTTGTGCCCTCTCAGTTAATAGTGATGAAGGGTATGTGAGTAAGGCCCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCGTTGCCAACTTCCGAAGTCACCGAGCTCTCCTCCGCTTCATTATATGGCTCTAACTCCCATAGTGCTTATCATTGTCGTGAGAATGCTCTTTATTCAAAGGATAACTTTCGCCATGTGGACTACAGAAACGTGCCGCTTAAGGTGAGGTCTTCTTGGGATGCAATGGAATCAAAGGCACAAAAGGTTGGAAACTGTCCAATAAAGAGATTCCAAACTGAAATTTTGCCTCCGAGTTCCGCTAAACCCATTCCTGTTACTCACAATAAGCTGTTATCTCCTATCAAGAGTCCTGGTTTTATGACCGCAAAGAATGCAGCTCACGTTATGGAGGCAGCTACCAAGATAATTGAGGCAAGCCCTCGGCCATATTTGAGAAATAAAATGTCCTCGGTTGGATCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTTCACAATTTGTAGCCATGCCTGAAAAGCTCGTGGGTCCGAGAACTGCCAACCTTGCAAATGGCAAGCATGGTGAGAGTAACAATAATTTATGTAAATATGCTCCAGCTTTAAATGGTTCAAGAGATTTGGGAAAAACTAGTTCTCGAAACTTATCAAGCAAAGCAAAGTCAGTTTCACATTCAATACAATCCCAAACCAATGTTCAGAGCAGAGATACAGTGACAGAAAATGGTAATAAGAAATACTTGAAGCAGAAAGGACAGGCTGAGATAAAATCTATTCAGTTCTCCAGGAGCCAGAAACCAAGTACACAGCGAGCCATGCAGCAGAAAACTGGCAGAAGCCGGGATAGCAATGTGCTTGGGCAGAATAATCAAAAGCAGAATAGTTTAACCAACAAAGGTAAATCAACTTCAAAAACAGATTTCACCAAGCCTACAACTCAAACATCATCTTCAGAAAGTTCTACTCGAATAAGGAAGACAAAGAACGAGGGTGCTGTAAATGCCAAGATTCAACCTAAAAGGTCAAGCACTAGAGCAACTGATTTCCAAAAGGGGATCCCACCATTCGATAGTATTTCTAAAAATAAAAAGTATATGAGCCGGGATGTTCATGAGGCGAGAGGTCACGATAAAGCTGTAAATAATTTTGAAAGTAAGTCCATAAAATGCAACGTTACTACTGACGGAAGTATTGATGAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTCACATTTACATCCCCCTTGAGGAGAAGCACGCCCGAGTCCTTGTCCTTTGCTGATCAGGTGGTGGAAAGTAGAAATAGAACCGATCTTGATTCTTTTGGGCATAATGATAATCATTATCCCAAAAAGTTATCATTTTCTCCTCCAGGGTTACCTATAATAAATGGTGATAGTTTAAGTTACTTATTGGAGAAAAAGCTTCAAGAATTGACATCTAGAATTGATTTGCCTCAGTGTACATTGGCCACCAAGGAGTCTTCTGCTGATTCGAGATCTTTTTTGCAAGACCAAGTTCCCAGTTTTGTAAGCCCTACATCCGGGGAACAAGGCGGAAGCTTTCACCCTTACCTGTTTAGTGATAAACTCGATAACATGCATGACTGGCGTTATTCAAATGATGGTCACATGAATCAGCAATTTCAGAGCCGATATGCTCATGTCAGTACTCTATCTCTTGTGCAGAAAGTAATGGAAGATACTAGCTGTAGTGGTTATGGTGACAATGGAAATGATCGAAGTTGTCAACATCCTAGAGCTGTCACAGTTTTTGAAAGTCCTTCTGTCAGTGAAAGCTACATGGATAGTGAAGACAGTGTATATGGCGGCACAGTTTTTTCGTACATTCAAGACGAAGAAGTATCTAATTTTTCTGATATAAATGAATCTGTATCACTTGAAAAGGAACCCAGTTCGGGGCAAAGCTCTTCTGTATTGGCAGATGAAAATATGGCTGTGAAACAACTAAGTGAAATGACAAATTTGGATGATTTTAAAATATCAAGGTACATGGGACTTGAATATGTACATGATATACTCACCAATGCAGAGTTTATGGCAGAAGAATATGTCATTGGCCAAATCAATACAATCATAATGCCGAACATCTTTGATCGGTTGGAGAATCAAATTGATGAAACAGAAAACTGTGAAGAGTTCTCTAAGCTTGAAAGGAAGGTTGTATATGACTATGTGAGTGAGTGGCTAGAGTTGAGATGTAGTCGAGCTTTTGTTGGAACCTGCAAAGGATGGCCTCGATGGATGATATCAATTCAAAAGAAGAGCGTTTTGGCCGAGGAATTGTACAAGCAGATGTTTGGATTCATAAACATCGAAGAGGAGGTAATGGTAGATGAGCTTGTCGACAATGACATGAGCATCGGTTTCGGGCGATGGCTTGACTTTGACGTTGAAGCCTTTGAAGAGGGTTTAGAGTTTGAGCAAGAAATACTAGATAGTTTGATGAATGAATTGGTTTCTGATTTGTTACATGTTTAA 2763 0.4003 MEMQKECSKGSFFSLFDWNSKSRKKLLWNNPNLPEGSKHGKENVENMPMVTNRIKVDKNGASPSNIVSSDFSCALSVNSDEGYVSKAPGLVARLMGLDSLPTSEVTELSSASLYGSNSHSAYHCRENALYSKDNFRHVDYRNVPLKVRSSWDAMESKAQKVGNCPIKRFQTEILPPSSAKPIPVTHNKLLSPIKSPGFMTAKNAAHVMEAATKIIEASPRPYLRNKMSSVGSSSVPLRILDLKERLEASQFVAMPEKLVGPRTANLANGKHGESNNNLCKYAPALNGSRDLGKTSSRNLSSKAKSVSHSIQSQTNVQSRDTVTENGNKKYLKQKGQAEIKSIQFSRSQKPSTQRAMQQKTGRSRDSNVLGQNNQKQNSLTNKGKSTSKTDFTKPTTQTSSSESSTRIRKTKNEGAVNAKIQPKRSSTRATDFQKGIPPFDSISKNKKYMSRDVHEARGHDKAVNNFESKSIKCNVTTDGSIDEDAFNMKESKDVISFTFTSPLRRSTPESLSFADQVVESRNRTDLDSFGHNDNHYPKKLSFSPPGLPIINGDSLSYLLEKKLQELTSRIDLPQCTLATKESSADSRSFLQDQVPSFVSPTSGEQGGSFHPYLFSDKLDNMHDWRYSNDGHMNQQFQSRYAHVSTLSLVQKVMEDTSCSGYGDNGNDRSCQHPRAVTVFESPSVSESYMDSEDSVYGGTVFSYIQDEEVSNFSDINESVSLEKEPSSGQSSSVLADENMAVKQLSEMTNLDDFKISRYMGLEYVHDILTNAEFMAEEYVIGQINTIIMPNIFDRLENQIDETENCEEFSKLERKVVYDYVSEWLELRCSRAFVGTCKGWPRWMISIQKKSVLAEELYKQMFGFINIEEEVMVDELVDNDMSIGFGRWLDFDVEAFEEGLEFEQEILDSLMNELVSDLLHV 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1433 920 Pfam DUF761-associated sequence motif 76 105 IPR032795 -
Lal3g1433 920 MobiDBLite consensus disorder prediction 338 405 - -
Lal3g1433 920 Coils Coil 892 912 - -
Lal3g1433 920 MobiDBLite consensus disorder prediction 262 281 - -
Lal3g1433 920 MobiDBLite consensus disorder prediction 289 324 - -
Lal3g1433 920 PANTHER DUF4378 DOMAIN PROTEIN 1 920 - -
Lal3g1433 920 MobiDBLite consensus disorder prediction 288 444 - -
Lal3g1433 920 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 920 - -
Lal3g1433 920 Pfam Domain of unknown function (DUF4378) 761 912 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1433 Lal-Chr3 20266022 20270789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1433 3 918 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.210 1.55e-96 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1433 - - lang:109330253 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1433 3 20266022 20270789 Lal3g1433 3 20266022 20270789 ECH
Lal3g1433 3 20266022 20270789 Lal5g0171 5 1483162 1487751 LSH
Lal3g1433 3 20266022 20270789 Lal18g0374 18 3202287 3207613 LSH
Lal3g1433 3 20266022 20270789 Lal13g0622 13 4044514 4049407 PCT
Lal13g0622 13 4044514 4049407 Lal3g1433 3 20266022 20270789 PCT