Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1431 ATGGTTTGCCAAGAAGAGCAACTATTAGTTGAAAAGGTGTGTGAGCTCTATGAACAAATCTCAAGTCTAGAGAGTCTAAAACCCTCAAAAAATGTGGACATGTTGTTCACTCAACTTGTCCTCACATGCATGCCACCTAGTCCAATTGATGTGTCCACCCTCAACAAAAATGTGCAAGAAATTAGATCCAAACTTATAAGACTATGTGGTGTAGCTGAAGGTCACTTAGAAAGTCACTACTCAACAATTCTAGGCTCATATGATAACCCTCTTGATCATCTCCATATTTTCCCTTACTATAACAATTACCTCAAACTTGGTCTCCTTGAATTCAATATCCTTAACCAACACATAACTAATGTCCCTAACAAAATTGCCTTTGTGGGTTCAGGTCCTCTTCCACTTACTTCAATTGTGCTAGCATCAAATCACTTACTCTCCACCACTTTCCACAACTATGATATAGACCATCTAGCTAATTCCTATGCTCAAAATTTGGTTATCCGTGACCCTGATTTGTCGAACCGGATGGTTTTTCACACCAATGATATATTGAATGTGTCACATGAATTGGAAGAGTACGAGGTTGTTTACTTGGCTGCACTTGTTGGAATGGACAAAGAGTCAAAGATTCATGTGATTGATCACTTGGCTAAGTACATGGCCCCAAGTGCAATTTTGATGCTAAGAAGTGCTCATGGTGCTCGTGCTTTCCTCTACCCAGTGGTTGAACCTTGTGACCTTAAAGGATTTGAGTTCCTCTCTGTGTTTCACCCAATGGATGAGGTTATTAATTCTGTTGTTATAGCACGAAAATATCCAATGCCTATAACATCATCACTTGACCAAGATATTGGTTCAATGATATTACCAAATAAATGTTCTGAAGTCCAAGTCTTCAATAACCCACTCATCAACCATGGGAGTATGATTGAGGAATTGACTGTTGATGAGCAACATTCTTGA 966 0.3903 MVCQEEQLLVEKVCELYEQISSLESLKPSKNVDMLFTQLVLTCMPPSPIDVSTLNKNVQEIRSKLIRLCGVAEGHLESHYSTILGSYDNPLDHLHIFPYYNNYLKLGLLEFNILNQHITNVPNKIAFVGSGPLPLTSIVLASNHLLSTTFHNYDIDHLANSYAQNLVIRDPDLSNRMVFHTNDILNVSHELEEYEVVYLAALVGMDKESKIHVIDHLAKYMAPSAILMLRSAHGARAFLYPVVEPCDLKGFEFLSVFHPMDEVINSVVIARKYPMPITSSLDQDIGSMILPNKCSEVQVFNNPLINHGSMIEELTVDEQHS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1431 321 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410|GO:0030418
Lal3g1431 321 PANTHER NICOTIANAMINE SYNTHASE 3 1 320 IPR004298 GO:0030410|GO:0030418
Lal3g1431 321 Gene3D Vaccinia Virus protein VP39 7 274 IPR029063 -
Lal3g1431 321 PANTHER SYNTHASE, PUTATIVE-RELATED 1 320 - -
Lal3g1431 321 Pfam Nicotianamine synthase protein 5 274 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1431 Lal-Chr3 20252894 20253859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1431 1 318 Nicotianamine Synthase Gene Family AT5G04950 59.877 1.15e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1431 K05953 - gmx:100794250 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1431 3 20252894 20253859 Lal3g1431 3 20252894 20253859 ECH
Lal3g1431 3 20252894 20253859 Lal18g0378 18 3233081 3234052 LSH