Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1426 ATGGAACAAACATCAAGATTGTTGAGAGAATCCAGTGATGTTGATAGATTGCCAGAAGAAATGAATGATATGAAAATTAGAGATGATAAAGAAATGGAAGCCATAGTTGTTGATGGTAATGGAACTGAGACAGGACATATTATTGTTACAACCATTGGGGGTAGAAATGGTGAACCTAAACAGACTATAAGCTATATGGCAGAGCGGGTTGTCGGGCATGGATCATTTGGAGTTGTTTTCCAGGCTAAGTGCTTGGAGACTGGTGAAACTGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGGTATAAGAACCGGGAGCTGCAAACAATGCGTCTTCTTGACCACCCGAACGTTGTCTCTTTGAAGCATTGTTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAATTTGGTACTTGAGTATGTTCCTGAAACAATTCATCGTGTGATCAAACATTACAACAAGTTGAACCAAAGGATGCCGCTGATATACGTGAAACTCTATACATATCAGATCTTTAGGGCTCTATCTTATATTCATCGTTGTATTGGAGTGTGTCATCGAGATATCAAGCCTCAAAATATTTTGGTCAACCCGCATACCCACCAGGTTAAAATATGTGACTTCGGAAGTGCAAAAGTCTTGATAAAAGGCGAGCCAAACATATCGTACATATGTTCTAGATATTATAGGGCACCCGAGCTTATATTTGGAGCAACTGAATACACCACAGCCATTGATGTTTGGTCTGTTGGTTGCGTAATGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGGTCCTGGGCACCCCAACAAGGGAAGAGATTAAGTGCATGAACCCTAACTACACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATTTTTCATAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTATCACGACTACTACAATACTCCCCTAATTTGCGATGCACGGCTTTAGATGCCGTGACCCATCCTTTCTTCGATGAACTTCGTGACCCAGACACTCGCTTGCTAAATGGTCGTTTGCTTCCACCGTTGTTCAATTTCAAATCTCATGAACTGAAGGGAGTACCCATTGAGATTTTGATGAAATTGGTTCCAGAGCATGCAAGAAAGCAATGCCTATTTCTTGCTTTGTGA 1206 0.4154 MEQTSRLLRESSDVDRLPEEMNDMKIRDDKEMEAIVVDGNGTETGHIIVTTIGGRNGEPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETIHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNILVNPHTHQVKICDFGSAKVLIKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDAVTHPFFDELRDPDTRLLNGRLLPPLFNFKSHELKGVPIEILMKLVPEHARKQCLFLAL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1426 401 Gene3D Transferase(Phosphotransferase) domain 1 145 393 - -
Lal3g1426 401 ProSitePatterns Protein kinases ATP-binding region signature. 71 95 IPR017441 GO:0005524
Lal3g1426 401 ProSiteProfiles Protein kinase domain profile. 65 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1426 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lal3g1426 401 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 12 398 - -
Lal3g1426 401 SMART serkin_6 65 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1426 401 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 12 398 - -
Lal3g1426 401 CDD STKc_GSK3 60 352 IPR039192 -
Lal3g1426 401 SUPERFAMILY Protein kinase-like (PK-like) 64 375 IPR011009 -
Lal3g1426 401 Gene3D Phosphorylase Kinase; domain 1 49 144 - -
Lal3g1426 401 Pfam Protein kinase domain 65 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1426 Lal-Chr3 20173896 20180135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1426 65 358 MAP Kinase Gene Family AT1G73670 38.658 7.94e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lal3g1426 Pkinase 2.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1426 K00924 - gmx:100795659 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1426 3 20173896 20180135 Lal3g1426 3 20173896 20180135 ECH