Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1424 ATGGGTATTAGTGATGAATTATCTAAGAAAACTTCAATCTTTGGTCTTAAGGTTTGGGAAATAATTGGAATTGTAGTTGGGTTGTTTATTGTTGTAATCCTCTCTGTGCTCTCACTTTGCCTTACTTCAAGGAAAAAATCTAGAAAAGTGATTAAGGATAACAAGTTTCTTATTAGTCAAATACCGAGTTTCTCGAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCAAGTAATGAATTTACTCCTAGTGATAGAATACTAGTTAAAGTTCATGATAAATCCAATGACAAAGAATCGGATGAAGTGATGGTTCATTTAGGTGTAGGGAAGAAGAAGAAGAAAAATTGGGATAGTGCTAGTCGTTCGGATTCATTTCATCGCATAGAGAAAGATGGAGGAGGGTCACAACAACAATCGGGCGAAGAGGGTAGCTCTGGCACGGTTACATTGTACAAGCACACTTCTTCATCAGTCCCGACAACAGCTCCTTCACCTCTCTCCGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTCAACTCGCTACAAATCGGTTTTCCAAGGATAATGTTGTCGGCGAAGGAGGGTATGGAGTTGTTTATCGCGGACAGTTGGTGAATGGGACACCCGTAGCAGTTAAAAAGATACTCAACAACGTTGGTCAAGCAGAGAAAGAATTTAGGGTGGAAGTTGAAGCTATTGGCCATGTTCGACACAAAAACTTGGTTCGCCTTTTGGGATACTGCATTGAGGGTACTGACAGGATGTTAGTCTATGAGTTTGTCAACAATGGAAACTTGGAGCAATGGCTTCATGGAGCAATGCGTCACGAAGGTTATCTTACCTGGGAAGCACGTATAAAGATTCTCCTTGGCACGGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAATCCAGCAACATATTAATTGACAGTGACTTCAATTCCAAGGTTTCTGATTTTGGTCTGGCGAAGTTATTGGAAGCTGGCGAGAGTCACGTCACAACGCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTCTGAATGAAAAGAGTGATGTTTATAGCTTCGGTGTTTTGCTATTGGAAGCAATAACGGGAAGAGATCCAGTCGATTATGGTCGTCCAGCACATGAAGTGAATCTGGTTGATTGGTTGAAGATGATGGTTGGAAACAGGCGATCGGAAGAAGTATTGGACGTAAACATCGAGGTGAGGCCATCAACTAGAGCTTTAAAAAGGGTTCTCTTAACAGCTTTAAGATGTGTAGATCCTGATTCTGAGAAAAGGCCTAAGATGAGCCAAGTTGTACGTATGCTGGAGTCAGAGGAATACCCTTTACCAAGAGAGGATCGGCGGCACCGAAGAACTAGAGGAGGAAGTGCAGAGATTGAATCCTTGAAGGAATTTTCTGACATAGAGAAGAGTGAGAGTTAA 1512 0.4246 MGISDELSKKTSIFGLKVWEIIGIVVGLFIVVILSVLSLCLTSRKKSRKVIKDNKFLISQIPSFSKEIKEVRVEQVSSNEFTPSDRILVKVHDKSNDKESDEVMVHLGVGKKKKKNWDSASRSDSFHRIEKDGGGSQQQSGEEGSSGTVTLYKHTSSSVPTTAPSPLSGLPEFSHLGWGHWFTLRDLQLATNRFSKDNVVGEGGYGVVYRGQLVNGTPVAVKKILNNVGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTDRMLVYEFVNNGNLEQWLHGAMRHEGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDSDFNSKVSDFGLAKLLEAGESHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPAHEVNLVDWLKMMVGNRRSEEVLDVNIEVRPSTRALKRVLLTALRCVDPDSEKRPKMSQVVRMLESEEYPLPREDRRHRRTRGGSAEIESLKEFSDIEKSES 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1424 503 Pfam Protein kinase domain 195 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1424 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Lal3g1424 503 MobiDBLite consensus disorder prediction 463 503 - -
Lal3g1424 503 Gene3D Transferase(Phosphotransferase) domain 1 270 480 - -
Lal3g1424 503 SMART serkin_6 194 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1424 503 MobiDBLite consensus disorder prediction 114 165 - -
Lal3g1424 503 ProSiteProfiles Protein kinase domain profile. 194 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1424 503 SUPERFAMILY Protein kinase-like (PK-like) 178 473 IPR011009 -
Lal3g1424 503 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 502 - -
Lal3g1424 503 MobiDBLite consensus disorder prediction 132 165 - -
Lal3g1424 503 MobiDBLite consensus disorder prediction 114 131 - -
Lal3g1424 503 PANTHER OS01G0323000 PROTEIN 3 502 - -
Lal3g1424 503 Gene3D Phosphorylase Kinase; domain 1 175 269 - -
Lal3g1424 503 CDD STKc_IRAK 210 466 - -
Lal3g1424 503 ProSitePatterns Protein kinases ATP-binding region signature. 200 223 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1424 Lal-Chr3 20150281 20158734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1424 109 468 Trihelix Transcription Factor Family AT1G70460 44.156 4.90e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal3g1424 Pkinase 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1424 - - gmx:100787014 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1424 3 20150281 20158734 Lal3g1424 3 20150281 20158734 ECH
Lal3g1424 3 20150281 20158734 Lal18g1303 18 15559837 15567820 PCT
Lal12g0565 12 4044710 4049466 Lal3g1424 3 20150281 20158734 PCT