Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1421 ATGTCTACAGCTACCTTCATAGATATCATCCTTGCTGTTATTCTTCCTCCACTTGGAGTATTCCTCAGGTTTGGTTGTGAGGTGGAGTTTTGGATCTGTTTGGTTCTCACCTTCTTAGGATATATTCCTGGAATTATTTATGCTGTCTATGCTATTACCAATTGTCAAGGGCATTCAAGTCTTTCTTCACAGTTATTATTAGTGTCAACATTTATTTGCAATTTTATTGTTACATGTGGCATTGGTCTTATGTGA 255 0.3647 MSTATFIDIILAVILPPLGVFLRFGCEVEFWICLVLTFLGYIPGIIYAVYAITNCQGHSSLSSQLLLVSTFICNFIVTCGIGLM 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1421 84 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 53 IPR000612 GO:0016021
Lal3g1421 84 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Lal3g1421 84 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 53 - -
Lal3g1421 84 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1421 Lal-Chr3 20121826 20123131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1421 1 54 RCI2 Gene Family AT3G05880 81.481 2.86e-28 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1421 - - psom:113334967 103.605