Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1420 ATGGTACAAGAGAGCACAGCCACATGTGTAGATATCCTTATTGCCATTATCCTTCCTCCTCTAGGTGTATTCCTCAAGTATGCTTGCAAGTGTGAATTCTGGATCTGTTTGGCACTCACCTTCTTAGGATATATTCCTGGAATTATATATGCTGTCTATGCTATCACCAAGAAAGCGTTTTTGTTAAGCAATGAGAGATTCTGTATGGACTTTGTTGCACAAGGTGGATAA 231 0.3983 MVQESTATCVDILIAIILPPLGVFLKYACKCEFWICLALTFLGYIPGIIYAVYAITKKAFLLSNERFCMDFVAQGG 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1420 76 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Lal3g1420 76 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 57 IPR000612 GO:0016021
Lal3g1420 76 PANTHER BNAC03G34420D PROTEIN 3 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1420 Lal-Chr3 20112407 20114628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1420 5 57 RCI2 Gene Family AT3G05880 75.472 1.04e-24 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1420 - - vra:106757363 106.301