Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1401 ATGGAAGAAACATTTGTACCTTTGGAAGGAATCAAGAATGATCTAAGAGGAAGGTTAATGTGTTACAAGCAAGATTGGACTAGTGGAATCAAATCAGGCATAAGGATTTTGGCCCCCACCACATACATATTTTTTGCTTCTGCAATACCTGTCATTTCATTTGGTGAACAACTAGAACGAGATACCGAGGGTGTTCTAACGGCTGTTCAAACATTGGCATCGACTTCGATATGTGGCATTATACACTCGATCATTGGTGGTCAACCCTTACTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTATACATTCATGTTCAATTTCGCGAAAGAGAGACCCGAGCTGGGTCGAAATATGTTTCTCGCTTGGACTGGATGGGTATGTGTCTGGACTGCAATACTGCTATTCTTACTAGCTATCTTAGGGGCATGCTCCATAATCAACAGGTTTACGCGTATTGCGGGAGAGTTGTTCGGTATGCTTATTGCAATGCTCTTTATGCAGCAAGCTATCAAGGGACTAGTGGATGAGTTTCGCATGCCAAAGCGAGAAGATCCAGCATCAACTCAGTTTTTACCTTCGTGGAGGTTTTCTAATGGAATGTTCGCTTTAGTCCTTTCGTTTGGCCTTCTCCTCACTGCATTAAAAAGTAGAAAAGCTAGATCATGGCGTTACGGTAGTGGTTGGCTTCGCAGCCTAATAGCCGACTATGGTGTTCCCCTTATGGTCCTAGTTTGGACAGGTGTGTCCTACATGCCATCTCGAAATGTTCCACATGGTATCCCAAGGCGCCTCTTTAGCCCAAATCCGTGGTCGCCCGGTGCATACGAAAATTGGACTGATATGGCGAATGTTCCCGTTGTCTACATAATTGGAGCATTTATCCCAGCGACCATGATTGCGGTGCTGTATTATTTTGATCACAGTGTAGCATCCCAGCTTTCACAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTATGACTTGCTCCTTTTGGGTTTCTTGACCTTAATGTGTGGCCTTATTGGAATCCCTCCTTCAAATGGAGTCATACCGCAATCACCTATGCATACGAAGAGTCTTGCAACTCTTAAACATCAGTTGCTTCGTAATAGACTAATGTCAACCGCACGAAGAAGTATCGCGAAAAATGCTAGTTTAGGACAGTTATATGGCAATATGCAAGAAGCCTACCATCAAATGCAGACACCTCTTATTTACCAGGAGTCCTCTGCTCAAGCACAGGGACTAAAAGAATTAAAAGAATCAACCATTCAAGCAGCTACAAGTTTAGGAAACATGGACGCCCCGGTAGATGAGACGATGTTCGATGTCGAGAAAGAAATAGACGATCTACTACCTGTCGAGGTAAAGGAACAGCGCGTCAGTAATTTGCTTCAATCAATAATGGTAGGAGGATGTGTTGCAGCCATGCCGTTCCTCAAGAAAATTCCGACCTCGGTCCTTTGGGGCTACTTTGCCTTTATGGCTATTGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGAAGATATAAGGTGCTTGAGGATTATCATGCAACTTTTGTTGAAACTGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACACTTTATCTTCTTGTATGCTTTGGACTAACTTGGGTTCCTATTGCTGGAGTCATGTTCCCTATGATGATCATGCTCTTAGTTCCGGTTCGGCAGTATTTCCTGCCGAAATTTTTCAAAGGGTTACACCTTCAAGACTTGGATGCAGCAGCATATGAAGAACAAACTGCATTACCATTCAACCTTGCAACACAATCAGAATTTGGAAATGGTGCTTCTCAGATTGATGAAAGTGAGATCCTAGATGGTGTTATCACTAGAAGCCGTGGCGAGTTTCGGCGCACTAGCAGTTCAAAGGTCACAAGCACAACTCCAACACCAGGAAATGATCACAAGAGTCATCAGAGCCCACGACTGTCGTTCAATTCTCGCCCTACTGAGCTAACAACCGAACGAAGTCCTCGGTCGGGCACCCGAAGTCCCTATAGTCCAAATGGTAGAGAAATGAGAGTATCAAACCTTGGAAGAAGTCCTCTTAACCATGATTCAAACTGCAGGACTACAAAAAAGTAG 2166 0.4354 MEETFVPLEGIKNDLRGRLMCYKQDWTSGIKSGIRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNMFLAWTGWVCVWTAILLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRMPKREDPASTQFLPSWRFSNGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYMPSRNVPHGIPRRLFSPNPWSPGAYENWTDMANVPVVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLMSTARRSIAKNASLGQLYGNMQEAYHQMQTPLIYQESSAQAQGLKELKESTIQAATSLGNMDAPVDETMFDVEKEIDDLLPVEVKEQRVSNLLQSIMVGGCVAAMPFLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTLYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGLHLQDLDAAAYEEQTALPFNLATQSEFGNGASQIDESEILDGVITRSRGEFRRTSSSKVTSTTPTPGNDHKSHQSPRLSFNSRPTELTTERSPRSGTRSPYSPNGREMRVSNLGRSPLNHDSNCRTTKK 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1401 721 PANTHER ANION EXCHANGE PROTEIN 1 697 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lal3g1401 721 PANTHER BORON TRANSPORTER 2-RELATED 1 697 - -
Lal3g1401 721 MobiDBLite consensus disorder prediction 646 698 - -
Lal3g1401 721 MobiDBLite consensus disorder prediction 642 721 - -
Lal3g1401 721 Gene3D Helical hairpin bin 18 60 - -
Lal3g1401 721 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Lal3g1401 721 Pfam HCO3- transporter family 202 370 IPR011531 GO:0006820|GO:0016021
Lal3g1401 721 Pfam HCO3- transporter family 459 549 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1401 Lal-Chr3 19937030 19941195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1401 1 686 Antiporters AT3G62270 81.449 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1401 K24194 - gmx:100809823 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1401 3 19937030 19941195 Lal3g1401 3 19937030 19941195 ECH
Lal3g1401 3 19937030 19941195 Lal18g0406 18 3441042 3444943 LSH