Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1395 ATGCATTTCCCAAAATTCTTTACCATCATTTTCATTTTGCAAGTCCTTATTTTTAGTTTTTGTGAATCCCAGCAATGTGCCAAACCACCCAAGACCATTCAAGTTGATCAAAGTGGATATAAACAATTCAAAACAATTCAAAGCGCCATTGACACTGTTCCACAAGGAAATTCTCAATGGATTCATATCCTAATTTCCCCTGGTGTTTACAAAGAGAAAGTCAAAATTGACACCAACAAACCATGCATTTTTCTTGAAGGAGCTGGAAGGAACTCTACAACAATTCAATGGGGTGATTCTGGCACTGCAAAACACACAGCTACTGTAGAATTAAATGGAAATAATACTCTTGTAAAAGGCATTACATTCGAGAATACGCACAACACAATAGATAGTACAAATGTGACTCAAGCCGTTGCAGTTAGGGTTCATGCAGATAAATGTGCTTTCATTGATTGTGGTTTTATAGGGGTTCAGGATACCCTATATGATTCTTTTGGCCGCCATTACTATCATAATTGCTATATTCAAGGTGCAACTGATTTCATATTTGGGACGGGTCAATCAATCTTTGAGGATTGTGAAATATTTTTTTCAAATGGACTTGGTTCACCAAAGGATGGGATTATTACAGCAAATGACAGAAAATCAGAAGATGATCCAAGTGCGTTTGTGTTCAAAAAATGTACTATAAATGGGAAAGGTGGAAAGACTAATCTTGGGAGAGCATTAAAACCAGGAAATCCAAGAGTCATCATAGCCAATTCATTCTTTGCTAATGTGATTAGAAAAGAGGGTTGGGCTGAAAAGAATTTCTTTCAAGGCCATGAGGAAAATATCACATTTGTAGAGGAGGAATGCACAGGACCAGGATCAGATCTCAAAGGTCGTGTGGCTTGGATCAATAAGTTGAAGAAATCAGAGATCAATAAATTCTTGGATATCTCTTTTATTGACAATGAGGGGTGGATTGCAAATTTGCCAGTAAATGTTTAA 996 0.3675 MHFPKFFTIIFILQVLIFSFCESQQCAKPPKTIQVDQSGYKQFKTIQSAIDTVPQGNSQWIHILISPGVYKEKVKIDTNKPCIFLEGAGRNSTTIQWGDSGTAKHTATVELNGNNTLVKGITFENTHNTIDSTNVTQAVAVRVHADKCAFIDCGFIGVQDTLYDSFGRHYYHNCYIQGATDFIFGTGQSIFEDCEIFFSNGLGSPKDGIITANDRKSEDDPSAFVFKKCTINGKGGKTNLGRALKPGNPRVIIANSFFANVIRKEGWAEKNFFQGHEENITFVEEECTGPGSDLKGRVAWINKLKKSEINKFLDISFIDNEGWIANLPVNV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1395 331 Gene3D - 31 331 IPR012334 -
Lal3g1395 331 Pfam Pectinesterase 33 320 IPR000070 GO:0030599|GO:0042545
Lal3g1395 331 PANTHER PECTINESTERASE 7 329 - -
Lal3g1395 331 SUPERFAMILY Pectin lyase-like 29 327 IPR011050 -
Lal3g1395 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 329 - -
Lal3g1395 331 ProSitePatterns Pectinesterase signature 2. 176 185 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1395 Lal-Chr3 19871712 19874331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1395 35 324 Carbohydrate Esterase AT1G05310 39.130 5.12e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1395 - - adu:107492287 370.163