Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1391 ATGCATTTCCCAAAATTCTTTAGCATCATTTTCATTTTGCAAATCCTTGTTTTTGGTTTTTGTGAATCCCACAAATGTGCCAAACCATACAAGACCATTCATGTTTGTCAAAGAGGAGATAAAACATTCAAAACAATTCAAAGTGCAATTGACACTGTTCCACCAGGAAATTCTCAATGGATCCGTATCCGAATTTCCCCTGGTGTTTACAAAGAGAAAGTAACAATTGACAACACCAAACGGTGCATTTTTCTTCATGGAGCTGGAAGGAACTCTACAACAATTCAATGGGGTGATTTTGGCAGTGCAAAACACACAGCTACTGTAGAAATAAGTGGAAATAATACTCTTGTAAAAGGCATTACTTTCGAGAATACGCACAACACAAGAGATAGTGAAAATGTGACTCAAGCCGTTGCAGTTAGGGTTCATGCAGATAAATGTGCTTTTATTAATTGTGGTTTTATAGGGGTTCAGGATACCCTATATGATTCTATTGGCCGCCATTACTATCATAATTGTTATATTCAAGGTGCAACTGATTTCATATTTGGATCGGGTCGATCAATCTTCAAGGGTTGTAAAATATATTTTTCAAATGGACTTGGTCCACCAAAGAAAGGGGTTATTACAGCAAATGAAAGAGAATCAGAGGATGATCCAAGTGCGTTTGTATTCAACAAATGTAAAATAAATGGTGAAGGTGGAAAGACTAATCTTGGAAGAGCATTAACATCAGGAAACCCTAGAGTGATCATAGCCAAATCATTCTTTGCTGATGTGATTAGAACAGAGGGTTGGGCTGAAAAGGATTTCTTTAAAGGCCATGAGTAA 834 0.3693 MHFPKFFSIIFILQILVFGFCESHKCAKPYKTIHVCQRGDKTFKTIQSAIDTVPPGNSQWIRIRISPGVYKEKVTIDNTKRCIFLHGAGRNSTTIQWGDFGSAKHTATVEISGNNTLVKGITFENTHNTRDSENVTQAVAVRVHADKCAFINCGFIGVQDTLYDSIGRHYYHNCYIQGATDFIFGSGRSIFKGCKIYFSNGLGPPKKGVITANERESEDDPSAFVFNKCKINGEGGKTNLGRALTSGNPRVIIAKSFFADVIRTEGWAEKDFFKGHE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1391 277 Gene3D - 21 276 IPR012334 -
Lal3g1391 277 Pfam Pectinesterase 33 269 IPR000070 GO:0030599|GO:0042545
Lal3g1391 277 PANTHER PECTINESTERASE 7 272 - -
Lal3g1391 277 SUPERFAMILY Pectin lyase-like 30 269 IPR011050 -
Lal3g1391 277 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 272 - -
Lal3g1391 277 ProSitePatterns Pectinesterase signature 2. 176 185 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1391 Lal-Chr3 19834682 19836714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1391 6 267 Carbohydrate Esterase AT2G19150 42.857 1.28e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1391 - - adu:107492287 302.367