Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1389 ATGTCAACCGGTTTATTCAAAAAGGTTCAAGGCTTGCTGCTGAAATGGTTGCATATATTATATTGCCTGGTACTTATGATTGAATCTGGTGTTTCATCACTGGAACCCTCATTGTTATCGCCAGCTAGGTCACCTTTGGCCTCTGTCGTTGTTCGTGATTTGCCGTTTCCGAAAAATCTACATGGGTCTAAGAAGCATTTCCCTTATCATGGTGCATCGATTACAGCACCGTCCCCAGTGAATCCTCCTTCATATGGTCCACCGCCTGCAAGTTTACATTTGTCAATACCATTCAAGAAGAGGAGTGAATTCAAACCTCCAATTTCTAACTTCAAAGATACTGCTCCTATGTATTCAAGTGCACCTGCAATGGCTCCTGCTTTGGTTCAACCACTGTTGTCCCCTTATGTTTCCAATTGTTGCAAGGAAGACATGGTATTGAAACGAGGCAGTACAAGTTGCCAGTGCGTGTATCCCATAAAGCTAGACCTTCTTCTTTTGAATGTCTCTCAAAATCCTAATTGGAACCTTTTTCTTGGCGAATTAGCTACCCAGCTTGGGTTGCAAAATGATCAGATTGAACTTATAAACTTTTATGTAGTCACCTTATCAACATTAAATATATCGATGGATATTACTCCACGTAAAGGTATCAGTTTCTCTGCCAATGAAGCATCTAAAATAAACTCTTCAGTTTCGATGCATATGGTTCAATTAGACCCTAGATTAGTGGGTGACTACAAAGTTCTCAATATGACATGGTTTGAACCTCCACCTCCTGCTCCAGCTCCTACTTTAGTAGCATCACCTGTGAAAGCACCTTTCTATCATTCACCTAAAGGTGCACCATCAAATTCTTCAAGTACGGGAAGGCATTCAAATTTGTTTCTTATTCTTGGAATTGCTATTGCCATACTCTTCACTGCCATCATATCTGCACTTATACTTTATGTATGCAAGTTTCTGCCAAAGGCGAAAACACCTCCCGTAGAAACTGAAAAGCCAAGGGCAGAAAGTGTGGTTTCAGTTGTGGGTTCTCTTCCCCACCCAACCAGTACACGATTTATTGCTTTTGAAGAACTTAAAGAAGCAACAAACAATTTTGAACCTTCAAGCATACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTGCTGTAGCAATTAAGAGGCTTACTAATGGAGGGCAACAGGGTGACAAAGAGTTTCTGGTTGAAGTTGAAATGCTTAGCCGGTTGCATCATCGCAACCTTGTAAAACTAGTGGGGTACTATAGCAATCGTGACTCATCACAAAACCTACTTTGCTATGAGCTTATCCCAAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCATTGGGAGTAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTTGATGCTGCTAGAGGACTTTCATATCTACATGAAGACTCACAGCCTTGTGTAATACACAGAGATTTCAAGGCGTCCAACATATTGCTTGAGAACAACTTTCATGCTAAAGTCGCAGATTTTGGTCTTGCTAAGCAGGCACCCGAAGGCAGAACTAATTACTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCCGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAATTGCTTACTGGAAAGAAACCTGTGGATATGTCACAGTTATCTGGACAGGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGACAGGTTGGAAGAGATAGCTGATCCAAGACTTGGGGGAAAGTATCCGAAGGAAGATTTTGTCCGCGTTTGCACCATCGCTGCGGCTTGTGTTGCTCCTGAAGCAAACCAACGACCGACAATGGGTGAAGTAGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATACAACGATTCAGTGTTACCCTCATCCAATACACGGGCCAACCTAAGACAGTCCTCGAGCACTTTTGAGTTTGATGGTACATCTTCAATGTTCTCTTCAGGTCCTTACTCTGGTCTAAGCGCTTTTGAAAATGACAACATTTCTAGGACGGTGGTTTTCTCTGAAGATCTCCATGAAGGACGATGA 2139 0.4245 MSTGLFKKVQGLLLKWLHILYCLVLMIESGVSSLEPSLLSPARSPLASVVVRDLPFPKNLHGSKKHFPYHGASITAPSPVNPPSYGPPPASLHLSIPFKKRSEFKPPISNFKDTAPMYSSAPAMAPALVQPLLSPYVSNCCKEDMVLKRGSTSCQCVYPIKLDLLLLNVSQNPNWNLFLGELATQLGLQNDQIELINFYVVTLSTLNISMDITPRKGISFSANEASKINSSVSMHMVQLDPRLVGDYKVLNMTWFEPPPPAPAPTLVASPVKAPFYHSPKGAPSNSSSTGRHSNLFLILGIAIAILFTAIISALILYVCKFLPKAKTPPVETEKPRAESVVSVVGSLPHPTSTRFIAFEELKEATNNFEPSSILGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELIPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGKKPVDMSQLSGQENLVTWARPILRDKDRLEEIADPRLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYNDSVLPSSNTRANLRQSSSTFEFDGTSSMFSSGPYSGLSAFENDNISRTVVFSEDLHEGR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1389 712 Gene3D Transferase(Phosphotransferase) domain 1 446 664 - -
Lal3g1389 712 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1389 712 PANTHER OS01G0750732 PROTEIN 8 712 - -
Lal3g1389 712 SUPERFAMILY Protein kinase-like (PK-like) 342 645 IPR011009 -
Lal3g1389 712 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Lal3g1389 712 Gene3D Phosphorylase Kinase; domain 1 349 445 - -
Lal3g1389 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Lal3g1389 712 Pfam Protein tyrosine and serine/threonine kinase 372 643 IPR001245 GO:0004672|GO:0006468
Lal3g1389 712 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 8 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1389 Lal-Chr3 19794859 19801136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1389 12 712 Receptor kinase-like Gene Family AT4G02010 66.248 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal3g1389 PK_Tyr_Ser-Thr 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1389 - - gmx:100793528 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1389 3 19794859 19801136 Lal3g1389 3 19794859 19801136 ECH