Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1362 ATGATGATGGATTCAGAAGAAGCATTATCCTTTTCTGTTGCATCAGTGGTGGAGAATGTACTTCAACAGCATGGTACACGCCTCAAAGATCTTGATTTGGAATTGAGAAAAACAGAAGAAGCTGCATCTAGAAGATATGAAGCAGCAGTGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAACCCTCTGAAGAAGAGTTTAGGTTTGGTTTAAGAAGTGGGATAATCCTTTGTAATGTTATTAATAAGGTTCAATTTGGAGCTGTGCCTAAGGTTGTGGAAAGTCCAATTGATTCTGCATTGATCCCTGATGGGGCACCACTATCGGCATATCAGTATTTCGAAAATGTCAGAAATTTTCTGGTGGCTGTTCAGGAAATTGGAATTCCTACCTTTGAGGCTTCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGTGTCTTGGCCCTTAAATCTTATAGTGAATGGAAACAAACTGGGGGAAATGGTGTGTGGAAATTTGGTGGAACTCTCAAACCGATTATCTCTACAAAATCTTTTGTGAGAAAAAACTCGGAGCCATTTACTAATTCCTTGTCAAGAACCTCTTCAATCAATGAAAAATCTCTGACTGCTCTTAATTCTCACATTGAGTCTGATGAAATGTCTGGTTCGCATTCTTTGAGTATGCTTGTTCGTACGATTCTATCCGATAAGAAGCCTGAAGAAGTTCCAATGTTTGTTGAATCTGTTTTGAATAAGGTTGTAAAGGAGTTTCAGCATCGAATCGCACGCAAAGGTGAACAGGTTGAGAACAAGATTCATATGGTAACGAAGGACGAGGATTTCATTCATAAAAACCACATTGCTGCTGAGGAATCAAGCAACCAAATTCTGAAGAAGCAAATGCTTTTTGATCAACAACAAAGAGACATTGAAGAACTAAAGCACACTCTTCACACTGCAAAAGCTGGTATGCAGTTCATGCAAATGAAGTTTCATGAGGAATTCTCCAATCTTGGCGTCGAAATTCATGACTTAGCTCATGCCGCTTCTGGATATCATAGAGTTCTCGAAGAAAACCGCATACTATACAATCAAGTTCAGGATCTTAAGGGTAGTATTAGGGTGTACTGTCGAGTAAGACCGTTCTTTCCGGGACAGCAAAACCATTTGAGCACAGTAGAAAACATAGAAGGTGGAACTATCACAGTTAGCATTCCTTCAAAGAACGGGAAGGGACGCAAATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACACAAGCTGAGATCTTCTGTGATATGCAGCCACTTATTAGGTCTGTTCTCGACGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACTATGACCGGACCGAAAGAGATTACTGAGAAAAGCCGAGGTGTAAATTACAGGGCTCTGAGCGATTTGTTTCGTATAGCTGATCAAAGAAACGACACTTTTCTCTATGAAATTTCTGTTCAAATGATCGAAATCTATAATGAGCAAGTCAGGGATCTACTGGTTACTGATGGAGCAAACAGAAGATATCCTTTTAACAGTTATTCGATTCATTTTCGGGAAAAGGTTATTTATTATACCTTTAGTTCTCACAAAGGGCTCAGTGTGCCAGATGCTAGCCTTGTTCCTGTATCATCAACAATTGATGTTATTGAACTAATGAACCGTGGGCAAAGGAACCGTGCAGTTGGAGCAACCGCCCTTAATGATCGTAGTAGCCGATCTCATAGTTGCTTAACAGTTCATGTTCAAGGAAGAGATTCGACATCCGGAGCTATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCTGGAAGTGAAAGGGTAGACAAATCTGAGGCCACTGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACATGTTCCTTACAGAAATAGTAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAAGCCAAGACACTAATGTTTGTTCACATAAGTCCAGAGAGTGATTCCATTGGAGAAACAATTAGTACCTTAAAATTTGCAGAAAGAGTTGCTACTGTCGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCAGATGTTAAAGAGCTCAAAGAACAGATCGCCAGCCTTAAGGCAGCACTGGCAAGAAAGGAAGGGGAATCAGAACGTTCTTTCTCCGGCAGCTCTGGAAAATACAGGACAAAGGCTAGGGAACTATCACCTTATCGAACAAACCAACGGGATGCAGATACCGATGATCACCTTGGATGCCGACTACCCATGGTTGAAGTTGGCAACATAGAGCTTCAAAGCAATACCCCATTTCGGCGCAAAACTCAAGGCTATGATTTCGATGAGATATCAACAAATTCACAACCCTGGCATCAAAACTATAGGGAAGATGATAAAGAAACCGGTTCTGGTGAATGGGTTGATAAAGTCATGGTAAACAAAACCGAGAACCTTTCGGGGTGTCGGGAAGCATGCAATGGAAACTTGTCTGAGGCCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAATGTACTCAGAACAATCCTATAATATGTTCATTGGAGGCAACAAGTATAACATTTCAGGTTCAGAAGAGATTGATGCTGCAACAAGTGATTCCTCAGAACCTGACTTACTTTGGCACTTTAATCATTCCAAACTTGCCACCATGACTAATGGAATTGGATCAAAGACTAAAAGATATGCCTCAAAGATAGCAAATAGACCAGAAATCAGCAAGAATACTATCCAACCTTCTATTGGTTCTTCTCCTTCATTCAAACGATCAAATAGTGTCTCACATCGAATAGGAAAGAGTTCATATCCACTTGACTTGAAACGTAAAACTGGGATTAGAAAATAA 2964 0.4042 MMMDSEEALSFSVASVVENVLQQHGTRLKDLDLELRKTEEAASRRYEAAVWLRKMVGVVAAKDLPAEPSEEEFRFGLRSGIILCNVINKVQFGAVPKVVESPIDSALIPDGAPLSAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCVLALKSYSEWKQTGGNGVWKFGGTLKPIISTKSFVRKNSEPFTNSLSRTSSINEKSLTALNSHIESDEMSGSHSLSMLVRTILSDKKPEEVPMFVESVLNKVVKEFQHRIARKGEQVENKIHMVTKDEDFIHKNHIAAEESSNQILKKQMLFDQQQRDIEELKHTLHTAKAGMQFMQMKFHEEFSNLGVEIHDLAHAASGYHRVLEENRILYNQVQDLKGSIRVYCRVRPFFPGQQNHLSTVENIEGGTITVSIPSKNGKGRKSFNFNKVFGPSATQAEIFCDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSRGVNYRALSDLFRIADQRNDTFLYEISVQMIEIYNEQVRDLLVTDGANRRYPFNSYSIHFREKVIYYTFSSHKGLSVPDASLVPVSSTIDVIELMNRGQRNRAVGATALNDRSSRSHSCLTVHVQGRDSTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDSIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGESERSFSGSSGKYRTKARELSPYRTNQRDADTDDHLGCRLPMVEVGNIELQSNTPFRRKTQGYDFDEISTNSQPWHQNYREDDKETGSGEWVDKVMVNKTENLSGCREACNGNLSEAFYQKYLQDSSKMYSEQSYNMFIGGNKYNISGSEEIDAATSDSSEPDLLWHFNHSKLATMTNGIGSKTKRYASKIANRPEISKNTIQPSIGSSPSFKRSNSVSHRIGKSSYPLDLKRKTGIRK 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1362 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 747 IPR027417 -
Lal3g1362 987 SMART kinesin_4 374 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 MobiDBLite consensus disorder prediction 948 971 - -
Lal3g1362 987 Gene3D - 34 164 IPR036872 -
Lal3g1362 987 ProSiteProfiles Calponin homology (CH) domain profile. 42 164 IPR001715 GO:0005515
Lal3g1362 987 Coils Coil 21 41 - -
Lal3g1362 987 PRINTS Kinesin heavy chain signature 449 470 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 PRINTS Kinesin heavy chain signature 585 602 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 PRINTS Kinesin heavy chain signature 616 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 PRINTS Kinesin heavy chain signature 665 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 271 - -
Lal3g1362 987 PANTHER KINESIN-LIKE PROTEIN KLP-3 271 984 - -
Lal3g1362 987 MobiDBLite consensus disorder prediction 815 835 - -
Lal3g1362 987 Pfam Kinesin motor domain 382 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 CDD KISc_C_terminal 374 717 - -
Lal3g1362 987 Coils Coil 722 749 - -
Lal3g1362 987 MobiDBLite consensus disorder prediction 765 783 - -
Lal3g1362 987 MobiDBLite consensus disorder prediction 948 987 - -
Lal3g1362 987 MobiDBLite consensus disorder prediction 747 783 - -
Lal3g1362 987 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 5 271 - -
Lal3g1362 987 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 271 984 - -
Lal3g1362 987 Pfam Calponin homology (CH) domain 43 164 IPR001715 GO:0005515
Lal3g1362 987 SUPERFAMILY Calponin-homology domain, CH-domain 42 175 IPR036872 -
Lal3g1362 987 Gene3D Kinesin motor domain 371 756 IPR036961 -
Lal3g1362 987 ProSiteProfiles Kinesin motor domain profile. 376 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal3g1362 987 SMART ch_5 44 162 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1362 Lal-Chr3 19391416 19397989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1362 367 715 Calmodulin-binding Proteins AT5G65930 42.254 6.89e-75 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1362 K10406 - gmx:100795476 1534.24