Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1353 ATGGAACATGTTACAAAACTCTTCTCGGTCTTGGCTCTCTTTATGGTTGTAATGTCACACCAAACTGGTGCATCAGAATTCAACAAAGGCAAAACCCTAATCAACAACCTATGCAACCTTTCACCAACAAAAGACCTATGCATTCAAGTTCTTTCCTCTGATGAAACAAGTTCAACTGCAGATCTTAGAGATTTAGCCGTTATCGCATTACGTGTCGCGGCCTCAAATGCTTCAAGCATCCTCACTGATGCAAAGATGCTTATTGATGATGTAAAATTGAACCCTAAAGTGCAACAAGGGTTATCAGATTGCAAAGAAAATATCTTAGATGCTGTGGATCAACTTGAAGATACAACTGCAGCATTGTTAGAAGATGATAATAGTCAAACTCAGAAATGGTTGAAAGCTGCATTGGCTGCTATAACAACATGTGATGCTTCTATTCCTGGTGATGATGATGTTCTTTCAGTGAAAAGTGCTCAATTCAGAAAATTGTGCAATATTGCCATACTTCTCACTAAGTCTTTGCCATACCATTCATAA 543 0.3831 MEHVTKLFSVLALFMVVMSHQTGASEFNKGKTLINNLCNLSPTKDLCIQVLSSDETSSTADLRDLAVIALRVAASNASSILTDAKMLIDDVKLNPKVQQGLSDCKENILDAVDQLEDTTAALLEDDNSQTQKWLKAALAAITTCDASIPGDDDVLSVKSAQFRKLCNIAILLTKSLPYHS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1353 180 Pfam Plant invertase/pectin methylesterase inhibitor 33 170 IPR006501 GO:0004857
Lal3g1353 180 PANTHER PECTINESTERASE 1 176 - -
Lal3g1353 180 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 176 - -
Lal3g1353 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
Lal3g1353 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 176 IPR035513 -
Lal3g1353 180 SMART PMEI_2 29 172 IPR006501 GO:0004857
Lal3g1353 180 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 175 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1353 Lal-Chr3 19327379 19327921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1353 8 144 Carbohydrate Esterase AT5G53370 25.532 8.76e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1353 - - gmx:102667060 226.483