Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1344 ATGTCTTTCTCAACAACAACCTTGGTCACATTCCTCTCAAGTACACCCTTTATGAAACAAACTTCAGAGGAAATCTCAACTTTACCTCAATGGTTGAGATTCATTTTCCTCTCTCCTTGTTCCCAAAGAGTTTTGTTATCTGCATTCAATGTTCTACTCTTACTCACCCTCTTTGTGATTTCAATTATAAAGCTTTGTTCTAAGTTCACTTCCAAATCCAATGTTAGCACCACCAATGAGCTTAACCATATAAGAAACAATGAGAAATCTTTTGTTAGAACAAGTATATGGTTTAAGCTAACTGTTACTGCAACTGTTGTTTTAACCATACTTTACATAGTTGCTTGTGTTATAGTGTTTACTAGTTCAAGTTCAACCAAGTTTGCATGGAACCAAATTGATGGGTTATTTTGGTTAGTCCAGGTTATAACACAAGCAGTTATTGCAGTTTTGATCATCCATGAGAAAAAAATTGAAGCTTTTACTCACCCTTTATCTCTTAGAATTTATTGGATTGCATATTTTATCATCATTTGTTTGTTCACAGCTTCTGGGATTATGAGATTTGTATCTGTGGATTTGGGTGTGGGTGAAATCAAAGACTTGTTTATCTTTAAGGTTGATGATATTGTATCTTTCATTTCTCTCCCTGTGTCACTGTTTCTTCTTTTTGTTGCTGTTAAAGGAACCACTGGGATTATTGTTATGTCTAGTGAAGTAACACAACCACTTATTAGTGAGGAAATTAAGTTATATGGTGATAATGTAAGCACAAGTGAAGTTACTGCTTTTGCTTCAGCTTCTGTTTTATCAAAGGCATTTTGGATTTGGATAAATCCCTTGTTGAGTAAAGGGTATAAGTCACCTTTGAAAATTGAAGAGATTCCAACCCTTTCACCAGAGCATAGAGCTGAGAGAATGTCATTACTATTTGAATCAAAATGGCTTGAATCGAATGAGGGATCGGCGCATCCGGTTCGAATCACATTGCTTAGATGTTTCTGGAAGGATTTAGTAATCACTGCTATCCTTGCTATGATTAGGCTATGTGTCATGTTTGTAGGACCAGTGCTTATACAAAGTTTTGTTGATGTCACCTCAGGGAAGGGAAGTTCCATATATGAAGGATACTACCTTGTGTTGATTCTTCTCATTTCTAAATTCATCGAAGTCTTGACGACTCATCATTTCAATTTCAGTTCTCAGAAACTTGGAATGCTTATCCGATGCACGCTCCTTACTTCTTTGTACAAGAAGGGGTTAAGGCTTTCATGCTCAGGTAGGCAAGATCACGGAGTCGGGACTATTGTGAATTACATGGCTGTTGATACTCAACAACTCTCGGATATGATGCTTCAGTTACACGCCGTGTGGATGATGCCACTTCAAGTTGGTATTGGCTTAATTCTGCTTTACAATTGCCTAGGTGCTTCTGCAGTCACAGCATTGGTTGCACTTATTGGTGTTCTTATTTTTGTTGTTATTGGTACCAAAAGAAACAACACCTTCCAATTCATTGTGATGAAGAACCGTGACTCAAGAATGAAAGCGATGAATGAGATGCTTAATTACATGCGTGTTATCAAGTTCCAAGCGTGGGAAGAACATTTCAATGAGAACATTTTGCGTTACCGTGACGCGGAATTTGAGTCACTTTCCAAGTTCATGTACTCCATCTGTGGCAACATTGTTATGATGTGGAGCACACCAATAGTGATATCAACTCTCACCTTTGGCACTGCGATTTTGCTTGGAGTTAAACTCGATGCAGCCACTGTTTTCACCACAACAACGGTGTTTAAGATCTTGCAGGAGCCTATTAGGGCATTCCCACAGTCTATGATATCTCTTTCACAAGCAATGGTATCATTGGAGAGGTTAGATAGGTACATGTTGACCAAGGAATTGTTGAATGATTCTGTAGAGAGAGAGGAAGGGTACTTTCAACAAATTGCGGTGGAGGTCAAGGATGGAACATTCAGCTGGGATGACGATAGCCTGCAACGGGACTTGAAACATATCAATTTGGCGATCAAAAAGGGGGAGCTTGCAGCAATTGTCGGGACTGTTGGGTCAGGAAAGTCATCTCTCCTTGCATCAATTCTCGGCGAGATGCGCAAAATCTCTGGAAAGGTTCGGGTTTTCGGGAGTACTGCTTATGTTGCACAAACGTCGTGGATTCAAAATGGAACAATTGAAGAAAACATTCTCTTTGGTTTACCAATGGACAGACAGAAGTACAATGAAGTTGTCAGGGTTTGTTGCTTGGAGAAAGATTTGGAAATGATGGAGTATGGTGATCAGACAGAGATCGGAGAGCGTGGCATCAACTTAAGCGGAGGCCAAAAGCAGCGTATACAACTCGCCAGGGCCGTATATCAGGACTGTGATATATATCTTCTTGATGATGTCTTCAGTGCCGTTGATGCTCATACTGGCTCTGAAATATTTAAGGAATGTGTGAGGGGAGCTCTAAAAGGCAAGACAGTTGTTCTTGTAACACACCAAGTAGATTTCCTTCACAATGTGGATCATATATTAGTGATGAGGGATGGAATGATAGTTCAATCAGGGAAGTACGATGATATACTAGAGTCTGGAGTGGATTTTAAAGCTCTTGTATCTGCACACGATACTTCTATGGAACTAGTAGAGCAAAGTGCGGTCGTTCCTGGTGAAAATTCGACCAAACCAACGAAATCTCTTGTGGCAGCTTCAAATGACAATGGAACCAATGGTGAGAGCAATTCTATCGAACAGCCGAAGTCTGCGAAAGGAAGTTCTAAACTCATCAAAGAAGAGGAGAGGGAAACGGGCAAAGTGAGTTTACAAATGTATAAACTCTACTGCACTGAGGCTTTCGGGTGGTGGGGTATTACAGGAATACTTGTTGTCTCTGTGTTATGGCAAATAATTACGATGGCAAGTGACTATTGGCTGGCATATGAAACCTCAGAAGAGCGCGCTCAAGTGTTTGACCCCATTATGTTTATTTCCGTCTATGCAATCATTGCTGTTATTTCGGTTATTTTTGTAGTGCTTAGATCCTACTCCTTCACAATCCTGGGACTAAAGACAGCTCAAATTTTCTTCACACAAATTCTTAGCAGCATCTTGCATGCACCCATGTCTTTCTTTGACACTACACCATCCGGAAGAATTTTAAGTCGGGCATCCACTGATCAGACCAATGTTGATATCCTACTCCCTTTGTTCATGGGTCTTGTTATTTCCATGTACATAACGGTGCTCAGCATCCTCTTCGTTACCTGTCAGAATTCTTGGCCAACCGTGTTCTTGTTAATTCCTCTTGTTTGGTTGAATCTATGGTATCGGGGTTACTTTCTTTCTTCATCTCGTGAATTAACTCGCCTGGATTCGATTACCAAAGCACCTGTTATTCATCACTTCTCTGAAAGCATTTCAGGGGTTATGACGATCCGTGCATTCAGAAAGCAGAATAATTTTTGTGAAGAGAACCTTAAGCGGGTGAATGCTAATTTGCGAATGGATTTCCACAATAATAGTGCCAATGAGTGGTTAGGATTCCGCTTAGAATTGCTTGGAAGCCTAGTCTTTTGCATTTCTACTTTGTTTATGTTCGTCTTACCCAGCAGTATCATAAAGCCAGAAAATGTCGGTTTATCTCTTTCTTATGGGTTGTCCTTGAATGCTGTCTTGTTTTGGTCTGTATTCATGAGCTGTTTCATTGAAAACAAAATGGTATCTGTTGAGAGGATAAAGCAGTTTACAAAGATTCCATCCGAACCATCATGGAATATTAAGGATCGTTTGCCTCCTCCGAATTGGCCAGCTCAAGGCAATGTCGATATCAAAGACTTGCAGGTCAGATACCGTCCAAACACTCCTCTAGTTCTTAAAGGCATCAGTCTAAGCATTACTGGAGGAGAAAAGATTGGCGTTGTCGGTCGAACAGGGAGTGGAAAATCAACTCTGATTCAAGTCTTGTTTAGGCTTGTGGAACCCTCAGGAGGGAAAATCATCATTGATGGTATTGACATAACTGTCTTGGGGCTTCATGATCTTAGATCAAGGTTCGGTATCATTCCTCAGGAGCCCATCCTTTTTGAAGGAACCGTCAGAAGCAACATTGATCCAATTGGACAGTATACAGATGATGAAATATGGAAGAGCTTGGAACGATGTCAACTAAAAGAAGCCGTGGCTTCTAAGCCTGAAAAACTCGACTCTCTAGTGGTGGATAATGGAGAGAACTGGAGTGTGGGGCAGAGACAGTTGCTTTGTCTCGGCCGGGTTATGCTTAAGCGAAGCCGACTCTTGTTTATGGATGAAGCAACTGCTTCTGTTGATTCTCAAACTGATGGTGTAATTCAGAAGATCATTAGGGAAGACTTTGCAGCATGTACCATTATCAGCATTGCTCACAGAATACCCACAGTCATGGACTGTGATAGAGTTTTAGTTGTGGATGCAGGGATAGCCAAGGAATTTGAGAAGCCCTCAATATTGATTCAGAGGCCATCACTTTTTGGGGCATTAGTTCAAGAATATGCCAACCGATCAACTGGATTATAA 4557 0.4066 MSFSTTTLVTFLSSTPFMKQTSEEISTLPQWLRFIFLSPCSQRVLLSAFNVLLLLTLFVISIIKLCSKFTSKSNVSTTNELNHIRNNEKSFVRTSIWFKLTVTATVVLTILYIVACVIVFTSSSSTKFAWNQIDGLFWLVQVITQAVIAVLIIHEKKIEAFTHPLSLRIYWIAYFIIICLFTASGIMRFVSVDLGVGEIKDLFIFKVDDIVSFISLPVSLFLLFVAVKGTTGIIVMSSEVTQPLISEEIKLYGDNVSTSEVTAFASASVLSKAFWIWINPLLSKGYKSPLKIEEIPTLSPEHRAERMSLLFESKWLESNEGSAHPVRITLLRCFWKDLVITAILAMIRLCVMFVGPVLIQSFVDVTSGKGSSIYEGYYLVLILLISKFIEVLTTHHFNFSSQKLGMLIRCTLLTSLYKKGLRLSCSGRQDHGVGTIVNYMAVDTQQLSDMMLQLHAVWMMPLQVGIGLILLYNCLGASAVTALVALIGVLIFVVIGTKRNNTFQFIVMKNRDSRMKAMNEMLNYMRVIKFQAWEEHFNENILRYRDAEFESLSKFMYSICGNIVMMWSTPIVISTLTFGTAILLGVKLDAATVFTTTTVFKILQEPIRAFPQSMISLSQAMVSLERLDRYMLTKELLNDSVEREEGYFQQIAVEVKDGTFSWDDDSLQRDLKHINLAIKKGELAAIVGTVGSGKSSLLASILGEMRKISGKVRVFGSTAYVAQTSWIQNGTIEENILFGLPMDRQKYNEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTVVLVTHQVDFLHNVDHILVMRDGMIVQSGKYDDILESGVDFKALVSAHDTSMELVEQSAVVPGENSTKPTKSLVAASNDNGTNGESNSIEQPKSAKGSSKLIKEEERETGKVSLQMYKLYCTEAFGWWGITGILVVSVLWQIITMASDYWLAYETSEERAQVFDPIMFISVYAIIAVISVIFVVLRSYSFTILGLKTAQIFFTQILSSILHAPMSFFDTTPSGRILSRASTDQTNVDILLPLFMGLVISMYITVLSILFVTCQNSWPTVFLLIPLVWLNLWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQNNFCEENLKRVNANLRMDFHNNSANEWLGFRLELLGSLVFCISTLFMFVLPSSIIKPENVGLSLSYGLSLNAVLFWSVFMSCFIENKMVSVERIKQFTKIPSEPSWNIKDRLPPPNWPAQGNVDIKDLQVRYRPNTPLVLKGISLSITGGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDITVLGLHDLRSRFGIIPQEPILFEGTVRSNIDPIGQYTDDEIWKSLERCQLKEAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGIAKEFEKPSILIQRPSLFGALVQEYANRSTGL 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1344 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 649 874 IPR027417 -
Lal3g1344 1518 Coils Coil 1147 1167 - -
Lal3g1344 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1268 1509 IPR027417 -
Lal3g1344 1518 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 89 1517 - -
Lal3g1344 1518 Gene3D ABC transporter type 1, transmembrane domain 328 628 IPR036640 GO:0005524|GO:0016021
Lal3g1344 1518 SUPERFAMILY ABC transporter transmembrane region 330 631 IPR036640 GO:0005524|GO:0016021
Lal3g1344 1518 SUPERFAMILY ABC transporter transmembrane region 956 1256 IPR036640 GO:0005524|GO:0016021
Lal3g1344 1518 CDD ABCC_MRP_domain1 653 852 - -
Lal3g1344 1518 CDD ABC_6TM_ABCC_D1 340 627 IPR044746 GO:0140359
Lal3g1344 1518 ProSitePatterns ABC transporters family signature. 778 792 IPR017871 GO:0005524
Lal3g1344 1518 MobiDBLite consensus disorder prediction 888 933 - -
Lal3g1344 1518 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 653 876 IPR003439 GO:0005524
Lal3g1344 1518 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 961 1239 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g1344 1518 Gene3D - 629 895 IPR027417 -
Lal3g1344 1518 Pfam ABC transporter transmembrane region 339 606 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g1344 1518 Pfam ABC transporter transmembrane region 965 1213 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g1344 1518 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 339 619 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g1344 1518 Pfam ABC transporter 671 804 IPR003439 GO:0005524
Lal3g1344 1518 Pfam ABC transporter 1293 1441 IPR003439 GO:0005524
Lal3g1344 1518 CDD ABCC_MRP_domain2 1274 1494 - -
Lal3g1344 1518 MobiDBLite consensus disorder prediction 889 924 - -
Lal3g1344 1518 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 1517 - -
Lal3g1344 1518 CDD ABC_6TM_ABCC_D2 959 1251 IPR044726 GO:0140359
Lal3g1344 1518 Gene3D ABC transporter type 1, transmembrane domain 922 1257 IPR036640 GO:0005524|GO:0016021
Lal3g1344 1518 Gene3D - 1260 1508 IPR027417 -
Lal3g1344 1518 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1276 1510 IPR003439 GO:0005524
Lal3g1344 1518 SMART AAA_5 680 861 IPR003593 -
Lal3g1344 1518 SMART AAA_5 1302 1486 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1344 Lal-Chr3 19227631 19234830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1344 653 869 Calmodulin-binding Proteins AT2G36910 30.901 1.12e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1344 - K05666 gmx:100793361 2327.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1344 3 19227631 19234830 Lal3g1344 3 19227631 19234830 ECH