Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1339 ATGGAGACCAATGACAAAGAATTTAATCTATCTATGTCTCCCAAAGGCCTAAATAATCCAATGAGCACATTAGATGAATGGATTCCTGCTTGTGATGAAGAATTGAAACCTGTAATTGGAAAGATATTTGATACATTGGAGGAAAGAGACAACTTTTATAAAAGTTATGCACATGCTAGTGGTTTTAGTGTTCGCAATTCATCCGAAACAACAGATAAAAGTGGTGTTAAGTGGAAGTATTTTCTTTGCTCTAAAGAAGGTTATAAGGTAGAGAAAAAAATAGAACTAGTTGAATTGCTTATTGATGAAAAAAGATTGCCTACAAGTAGAAGAAAACTAACAAGGGAAGGGTGTAAGGCAATAATTGTTTTTAAGAGGACATTGGAAGGAAAGTTTACAATTCAACGATTTCATGAAGGTCATACACACGCATTAGCCACACCAAGAAAGAAACAATTCCTTAGGTCTGCAAGAAGTGTAAACAATGTTCATAAGAATTTGTTACTTTCTTATAGTAGAGCTAACGTGAGGACATCAAAAAGTTACCAACTAATTAAATAG 561 0.3351 METNDKEFNLSMSPKGLNNPMSTLDEWIPACDEELKPVIGKIFDTLEERDNFYKSYAHASGFSVRNSSETTDKSGVKWKYFLCSKEGYKVEKKIELVELLIDEKRLPTSRRKLTREGCKAIIVFKRTLEGKFTIQRFHEGHTHALATPRKKQFLRSARSVNNVHKNLLLSYSRANVRTSKSYQLIK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1339 186 Pfam FAR1 DNA-binding domain 51 146 IPR004330 -
Lal3g1339 186 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 32 162 - -
Lal3g1339 186 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1339 Lal-Chr3 19185671 19186231 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal3g1339 FAR1 2.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1339 - - soe:110798711 163.31