Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1315 ATGTCCAACAATGTTTCCACATATAACCAGCTTCCAAACAAAGAGAAAAGGAAAATAAGTGAAGAACTTGAGGCCAATCTAAGATCAAACAAGAAGATGGTAATTAACCAACAATCTGCATCAAAGAACCAAGAGAAAGGGAAGGAGTTATCAATGGTTGAATATCCAAAACTCTTCCATGACAAGAAGAAGGTAACCCTAGATAAAGAACCTGATGCAAGTGATGATTATTCAAAGTATCCCAAAATTTTTGGAGTAATTCTTATGCCTTTCAAGGGAATGCAAAAGGGTCCTTACCCTTGTGGCTTATGTGAGAAAAGTTTCCTCACTCCACAAGCTTTAGGGGGTCACCAAAATGGTCACAAATGGGAGCAAACTATCAAACAATCAAAAGAAGGTATACAATTATTTATGGCAAGCAATAATAAGCACTCTAACTTACCTAGTTTCAAAGGTGATGGTGGAATTGATGGAACATTTCAGCTTGAAGGTGCAAATAGATTCAATGATGGGACTATGTATTTTTCTCAGGAGATTAATGCAAAGTTCAACAACTATGGTAAGATGGAAAATATTTCTAGACTCGAGAGACATATGAATGAAGCTAAAGAGATTCAACCTTCTGGAAAATCAGAATTTGACTTTACTTTATTGCCAAAAAGTAATCATGTTATTGATTTTGGTTTGCTTTCAAGGAGAAATGGTGAAGACATTGATAATCGCAAGGATGAAGCCTAA 738 0.3564 MSNNVSTYNQLPNKEKRKISEELEANLRSNKKMVINQQSASKNQEKGKELSMVEYPKLFHDKKKVTLDKEPDASDDYSKYPKIFGVILMPFKGMQKGPYPCGLCEKSFLTPQALGGHQNGHKWEQTIKQSKEGIQLFMASNNKHSNLPSFKGDGGIDGTFQLEGANRFNDGTMYFSQEINAKFNNYGKMENISRLERHMNEAKEIQPSGKSEFDFTLLPKSNHVIDFGLLSRRNGEDIDNRKDEA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1315 245 MobiDBLite consensus disorder prediction 1 24 - -
Lal3g1315 245 MobiDBLite consensus disorder prediction 30 46 - -
Lal3g1315 245 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Lal3g1315 245 Gene3D Classic Zinc Finger 81 152 - -
Lal3g1315 245 PANTHER ZINC FINGER PROTEIN JAGGED 49 165 IPR045320 GO:0003700
Lal3g1315 245 SUPERFAMILY beta-beta-alpha zinc fingers 96 126 IPR036236 -
Lal3g1315 245 PANTHER OS02G0182300 PROTEIN 49 165 - -
Lal3g1315 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Lal3g1315 245 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1315 Lal-Chr3 18919374 18920111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1315 99 164 C2H2 Transcription Factor Family AT5G57520 39.394 3.64e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal3g1315 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1315 - - lang:109329350 244.588