Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1310 ATGTATCAATATTCTTCCCTTGTGGAAACTCAATGGGAACACTTACCCAAAGTTTTTGGATCAGAACAACTGAGTTATGAGCCTATAAAATCACCCTTCAACATTGTCAATAATCCTCTTCAAACACCATCAAGTTTTTGTTCAAGTTCAACCATAAACCTAGTCAACTTTCAACCTCAACAATATGATCAAATTAATGTTCCTGATTGGTGCTTTGAATTTCCAAAGACAACAACATCAGAAACATACACACCCATGATGTTTTCTCAACAAGCTTGTGGAGATAACTTCACCAATAACACTAAACAAGATCCACCATTATCTCAACTCACAAGCTCTTTGCATTCTGTTGCTGAATCTTTCTTGTCTAGTAGTGTAGATAGTCATTCTTCACAAAAAGATAGTGATTTTGATTCTTATGCTGAAAAATATAGTAATTTTCAGCCTCAAAATATATCATTTTATGAGCACCTTCCACAAGAGAATGATGAATTACTGAAGGATGATGGTGCCACAGATGAGAAGACCATTGAAATCTCCTTTAAGAGAAATCAGTTGTCTTCAAGTACAAAAACAGAAAAGCAGCATCCTCAACCTCATGGGGTTAATTGTGTCACTTCTAGCAACTCTCATCCAACATGTAAAAGAAGAATAAGATGGACCAATGATCTTCATGAATCATTTATGATCATTGTTAATCGCCTTGGTGGTCCTGAAAAGGCAAAGCCTAAGGCTATACTAGAAGAGATGATGAAATTAGATAATTTGCTTTCCATTTCTCACATTAAAAGTCATTTGCAGAAATGTAGGACTACAAGAAACATTCACAAAGAGGAAAGATCTGAGGAAGGACTTAGAACAAAAGGGGCCACTGAGCTTCAAGACAAAATCCATATGCAAATTGAAGAATCACAGAAATTGCAGCTTGAGATCCGGAGGACTATTCACCAACAACTAGAGATGCAACAAAATTTGGAAGTGCTAATTCAACAAGAGAGGAAGCAGCTGAAAATATTGTTAAATAACCAAAAGGAAAGAACAAAATTGGAGAAAATCTTTGACACAGAACTGGACATGAGTGACTTAGAATGA 1092 0.3571 MYQYSSLVETQWEHLPKVFGSEQLSYEPIKSPFNIVNNPLQTPSSFCSSSTINLVNFQPQQYDQINVPDWCFEFPKTTTSETYTPMMFSQQACGDNFTNNTKQDPPLSQLTSSLHSVAESFLSSSVDSHSSQKDSDFDSYAEKYSNFQPQNISFYEHLPQENDELLKDDGATDEKTIEISFKRNQLSSSTKTEKQHPQPHGVNCVTSSNSHPTCKRRIRWTNDLHESFMIIVNRLGGPEKAKPKAILEEMMKLDNLLSISHIKSHLQKCRTTRNIHKEERSEEGLRTKGATELQDKIHMQIEESQKLQLEIRRTIHQQLEMQQNLEVLIQQERKQLKILLNNQKERTKLEKIFDTELDMSDLE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1310 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 13 358 IPR044848 GO:0003700
Lal3g1310 363 Gene3D - 214 274 - -
Lal3g1310 363 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 13 358 - -
Lal3g1310 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 271 IPR006447 GO:0003677
Lal3g1310 363 SUPERFAMILY Homeodomain-like 214 271 IPR009057 -
Lal3g1310 363 MobiDBLite consensus disorder prediction 183 212 - -
Lal3g1310 363 Coils Coil 290 310 - -
Lal3g1310 363 Coils Coil 322 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1310 Lal-Chr3 18851530 18856050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1310 202 343 G2-like Transcription Factor Family AT4G28610 39.865 5.29e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal3g1310 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1310 - - lang:109344853 550.051