Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1309 ATGAACCAGAACAAGATTGATTGCCATGGACTGATTCAACACAGTCATGGTCTAAATGGGACTTTGAATGCCGAGTTTGGGAATTATTCTTGTGAGTATTTTGATATGAAACAAACTTGTCATATTAGAAGTTGCAATCAACCACTTGCAATGGTTAGAGTTGGAGGAGGAGGAGCAGAACAACCACCGTACATAGCCACTGCCAAATCATCAAACCCCATTATCGGCCATTTTGAGTCACCGGCCGAACGGTCTACCAGCTTCATAGAATATGATGGCCAAGTTGGAAGTAGTAGTCACTCTTTTAGCCCTCAAATCTCTATGATCAATGATTTGGAATTCCCTTTGTATCAATCTCATAGGGAAAATATTTTCATTGAATTGTTCAACTCCAACAATTTGCAAGCAATGGTAAAATCTCAATTGAATAATAACCAATGTTGTACATCCCCTAAAAAATCCAATACGATTCCATGTGGGTTTTTTCCTAGCACCAAGTTCCTTCCATTTGAACAACAAAATTTCTTCATTGAAAGCACATCATTTCCTATTGAAGGAAATCAGGATCATTCAGTAGCTTATGGAACTTATAACTTACCTGCTGCACAAATGAAATTCTCTTCTTGGAATGAAAAATCTACTACAATTTCATCAGGAAAAGGGTTAACTACTTCTGGAAACCCTGCTTCGAATCGAAAAATTGTCGCGAGTAAAGCGCGAATAAGATGGACTCTGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATTGCCTTGGTGGTGCTGAGAAAGCAACACCAAAAGCTATATTAAAGATGATGGACTTAGATGGATTGACAATCTTCCATGTCAAAAGTCATTTGCAAAAATATAGAATTGCAAAGTACATGCCAGAGCCATCTCAAGGGAAATCTGAGAAAGAAATCCACACTGTGAATGTGCATCATCTTGATGTCAAAACTGGCTTGCAAATTAGAGAAACACTTCAGCTTCAATTAGATTCTCAAAGGCGTCTTCATGAACAACTAGAGATTCAGAGAACATTACAGCTAAGAATTGAGGAACAAGGGAGGCAGCTGAAAAAAATGTTTGATGAGCAGCAGAAGACAACTAATAACCTCACCAATGCTACTCAGAATACAATCAATGATGTTATAGCAATTGGTCATAAAGATGTTGATGTTTCAATTTTTAATGGGTATTGA 1203 0.3757 MNQNKIDCHGLIQHSHGLNGTLNAEFGNYSCEYFDMKQTCHIRSCNQPLAMVRVGGGGAEQPPYIATAKSSNPIIGHFESPAERSTSFIEYDGQVGSSSHSFSPQISMINDLEFPLYQSHRENIFIELFNSNNLQAMVKSQLNNNQCCTSPKKSNTIPCGFFPSTKFLPFEQQNFFIESTSFPIEGNQDHSVAYGTYNLPAAQMKFSSWNEKSTTISSGKGLTTSGNPASNRKIVASKARIRWTLDLHEKFVECVNCLGGAEKATPKAILKMMDLDGLTIFHVKSHLQKYRIAKYMPEPSQGKSEKEIHTVNVHHLDVKTGLQIRETLQLQLDSQRRLHEQLEIQRTLQLRIEEQGRQLKKMFDEQQKTTNNLTNATQNTINDVIAIGHKDVDVSIFNGY 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1309 400 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 238 293 IPR006447 GO:0003677
Lal3g1309 400 Pfam MYB-CC type transfactor, LHEQLE motif 322 369 IPR025756 -
Lal3g1309 400 Coils Coil 325 345 - -
Lal3g1309 400 Gene3D - 237 296 - -
Lal3g1309 400 SUPERFAMILY Homeodomain-like 236 292 IPR009057 -
Lal3g1309 400 Pfam Myb-like DNA-binding domain 242 291 IPR001005 -
Lal3g1309 400 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 51 396 - -
Lal3g1309 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 396 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1309 Lal-Chr3 18834596 18838862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1309 229 391 G2-like Transcription Factor Family AT4G28610 52.121 1.35e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal3g1309 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1309 - - ccaj:109797364 435.647