Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1303 ATGTTTTTGTTAGATATCTTTTTCTTTTCCCTTAAGGTTGTGTGTGAAGATGGGAGCAGGTGGCCGAACCTCTGTTCCTCCTCCGAGCAAAAATCAGAGGATGACTCTGTGAACCGAGTTCCGTTCGAAAAACCTCCATTCAGCCTGAGCCAAGTGAAGAAGGCCATTCCACCTCACTGTTTTCACCGCTCCGTTCTTCGATCATTCTCCTATGTTGTCTATGATCTCACCATTGCCTCCATCCTCTATTATGTTGCCACACATTACTTCCACCAACTCCCTAGTCCTTTCTCTTCATTGGCCTGGCCTATCTACTGGGCTATCCAAGGATGTGTCCTTACTGGTGTTTGGGTCATTGCACATGAGTGTGGCCATCATGCATTTAGTGATTACCAATGGCTTGATGACACTGTTGGCTTTGTTCTTCATTCTGCTCTCTTAGTCCCTTACTTTTCATGGAAATATAGCCATCGCCGCCACCACTCCAACACCGGATCTCTCGATAGGGACGAGGTCTTTGTGCCTAAAAAGAAGTCCAGTATCCAATGGTACTCTAAATATCTTAACAACAACCCATTAGGCAGGTTTATCACACTTACTGTCACCCTTACCCTTGGCTGGCCCCTATACCTGGCTTTCAATGTTTCGGGTAGGCCTTACGAAAGATTTGCTTGTCACTTTGATCCATATGGACCGATTTACTCAGACCGCGAAAGGCTCCAAATATTCCTATCTGATGCAGGAATACTTGCTGTATGCTATGGCCTATTCCATTTGGTCATGGCAAAAGGGCTTTCATGGGTTGTGTGTGTTTATGGAGTTCCATTGCTAGTGGTGAATGGGTTTTTGGTGTTGATCACATTCTTGCAGCATACTCACCCTGCATTGCCACATTACGATTCGTCCGAATGGGACTGGTTTAGAGGAGCATTGGCAACTGTGGACAGAGATTATGGAATTCTGAACAAGGTATTCCATAACATAACAGACACACATGTAGCACATCACTTGTTCTCAACAATGCCACATTATCATGCAATGGAGGCTACAAAGGCAATTAAACCGATTTTGGGAGAGTATTATCGGCTCGATGAGACGCCATTTTACAAGGCAGTGTGGAGAGAGGCAAGAGAGTGTGTTTATGTTGAGCCAGATCAAGTTACTGAGAGCAATGGTTCTGTGCTTATTGGGAATAATTTTGTTGAACCTGGTATTGGTAGTAGTAACAATATTGTAGCATTATGGTTTACTCGATTGCAGAATAAGATTCGCTGGCCCAGATTTAAAACCTTGGTTATGCCTAGTTTTTTCGTTGCTGTTATCCGGGGATCGAATTGTGGTTCACTATTGTGGCCTCTATCACTGCGCCAGATAGTGTGCCCTGTGTTAGAATTGGAAGAGGGCAAGGAGTGTGTCATTATTGGAACCCTCTATAAACACATGAAGCTCAAACCTCGTGTTCTTGATGAGTATTCTAAGGAGAAGTCCACAATTCCGCTTGTCAAGCCTCATAATTTCATTCACTCGGATGATTATCTAATTTTGGAAGATGAAAAAGGGAGAGTTAAGCTCGGTGGGAATTTCATTTCGCCTTCTGTATATGCAACAGGAGTTGTGGTCGCTTTACATGGAAAGGAATCGGGAGCGGGTGATTTTTTGGTTCTGGATGTTCTAGAAGCTGGCCTACCACCACAAATAGACCGTCCCCTTAAATCAAGGGAAGACAAATATGTTGTTTTTCTGTCAGGGTTAAGTATTGGGAGAAGCAACTCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACTGGTCATTTAGGAGATGAGATGGAGCAGAGTATAGCATCTCAAATTGTTCATGTTATCATTGCTGGAAATTCTGTTGAGATACCTCCTGGACTTCTTAATGGACAGAATTTGGCTTCAAAAGATCTCTCAAGGATAGCCGAACCAATAAAGGAACTGGATATCATGTTGAATCAGATTGCTGCTGGTTTGCCATTGGATATCATGCCAGGACCCAATGATCCTTCTAATTTTGCATTACCACAACAGCCATTGCATAGATGCCTTTTCCCTGGGTCATCAGCTTATAACACTTTTAGGTCTTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACAGCGGGTCAGAATGTAGATGATCTAGACAAGTATTCAGAGGCAAAAGATAAACTTGAGTTCATGGAAAGGACATTAAGGTGGAGACATTTGGCACCCACAGCACCCAATACTCTTGGGTGTTATCCTTATACGGACAAGGATCCTTTCCTCATTGATATCTGTCCTCATGTTTACTTTGTTGGCAATCAGAATAAATATGAGACCCGAATTATAAAGGGATCAGAAGGGCAGTTAGTGAGACTCATATGTGTTCCTAAATTCAATGAAACTGGAGTCGCTGTTGTGTTAAATTTGAAGGATCTTGAGTGCCATGCCCTCAGTTTTGGAACTCAGTTAAGCTCATAA 2508 0.4274 MFLLDIFFFSLKVVCEDGSRWPNLCSSSEQKSEDDSVNRVPFEKPPFSLSQVKKAIPPHCFHRSVLRSFSYVVYDLTIASILYYVATHYFHQLPSPFSSLAWPIYWAIQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGFVLHSALLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKKKSSIQWYSKYLNNNPLGRFITLTVTLTLGWPLYLAFNVSGRPYERFACHFDPYGPIYSDRERLQIFLSDAGILAVCYGLFHLVMAKGLSWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRLDETPFYKAVWREARECVYVEPDQVTESNGSVLIGNNFVEPGIGSSNNIVALWFTRLQNKIRWPRFKTLVMPSFFVAVIRGSNCGSLLWPLSLRQIVCPVLELEEGKECVIIGTLYKHMKLKPRVLDEYSKEKSTIPLVKPHNFIHSDDYLILEDEKGRVKLGGNFISPSVYATGVVVALHGKESGAGDFLVLDVLEAGLPPQIDRPLKSREDKYVVFLSGLSIGRSNSNPLQFQLLIDHITGHLGDEMEQSIASQIVHVIIAGNSVEIPPGLLNGQNLASKDLSRIAEPIKELDIMLNQIAAGLPLDIMPGPNDPSNFALPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNVRFLGTAGQNVDDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFLIDICPHVYFVGNQNKYETRIIKGSEGQLVRLICVPKFNETGVAVVLNLKDLECHALSFGTQLSS 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1303 835 Pfam DNA polymerase alpha/epsilon subunit B 578 787 IPR007185 GO:0003677|GO:0006260
Lal3g1303 835 Pfam Fatty acid desaturase 101 362 IPR005804 GO:0006629
Lal3g1303 835 PANTHER OLEATE HYDROXYLASE FAH12 36 393 - -
Lal3g1303 835 CDD MPP_PolD2_C 577 829 IPR041863 -
Lal3g1303 835 CDD Delta12-FADS-like 63 346 - -
Lal3g1303 835 Gene3D - 566 834 - -
Lal3g1303 835 Gene3D - 445 560 - -
Lal3g1303 835 Pfam Domain of unknown function (DUF3474) 41 78 IPR021863 GO:0016717
Lal3g1303 835 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 36 393 - -
Lal3g1303 835 Pfam DNA polymerase delta subunit OB-fold domain 458 557 IPR040663 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1303 Lal-Chr3 18778036 18788225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1303 459 835 Core DNA Replication Machinery Family AT2G42120 76.127 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1303 K10256 K02328 gmx:547815 681.404